Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g1458 ATGAAGTATATTCGGACCAACAATTTCAAGCGCCTCTTCTCTTTCAGACGACGCAGTTTCGAGGATCAAGTTTTGACTCGAGGCGAGACAGAAGAACCTCCTAAAAGACCCACTTGGAAATGCTTCTCTTATCAAGAATTATCTGATGCCACCAATGGCTTCAGCTCAGGAGATCTGGTAGGAAAAGGAGGATACGCAGAGGTTTACAAGGGAAGATTAGAAGATGGTGAGGAAATTGCAGTAAAAAGGCTCACAAGAACGTGTAATGATGAGAGGAAAGAGAAGGAGTTTCTGACAGAGATAGGAACAATTGGTCATGTGCGTCATTCAAACGTTTTGCCTCTCCTTGGTTGCTGTATTGACAATGGGCTTTACCTCGTCTTCGAGCTTTCCTCTAGAGGTTCTGTTGCTTCTCTTCTTCATGATGAGAAAGCGCCTCCGGTGGATTGGAAAACAAGGCACAAGATAGCTCTTGGGACTGCACGTGGCCTCCACTACTTGCACAAGGGATGCCAGAGAAGGATAATTCACAGAGACATCAAGGCCTCCAACATTTTATTGACTGCAGATTTTGAACCACAGATATCTGATTTTGGACTGGCGAAATGGCTTCCATCTCAGTGGACTCATCATTCAATTGCCCCAATAGAAGGAACATTTGGGCATTTGGCACCAGAGTACTATATGCATGGAATAGTGGATGAGAAGACAGATGTATTTGCATTTGGGGTGATTTTGCTGGAACTCATCTCTGGGAGGAAACCTGTGGATGGCTCACACCAAAGCCTACATAACTGGGCTCAACCAATATTGAAGAGAGGGGAATTGGAGAAGCTGGTAGATCCAAGGCTTGAAGGGGTATATGATGTGATACAGTTAAACACACTTGCCTTTGCAGCCTATTTGTGCATTCGAGCATCTTCAACTTGCCGACCTTCCATGAGTGAGGTATTAGAGGTAATGGAAGACGCAGAAATAGATAAAGATAAATGGAAAATGCCAGAGGAAGAACAGGAAGAGGCAGAGCATTTATGGGTTTTAGAGGATTTGGAATATGAATATGACAGTTCCTCCTCAATGTCTCTCCCAGAAAATATTAGAAATCTGGGGTCTTCTTTCACGGCGACGGTGAGGCACCACAAGGAGATCGATTTTCATCATCTTCGTCCATTCGATCTTTCTAGCTGGCTTGATCAAAGATTTCTCGATCCATTACTCCTCCCTCCCTCTTTGGTCGATCGAAGATTTACCATATCTGTTCCTCATTCTTTTATCATATCTGGGCGAAGCTTAAGGAAGGAGGAAGAGAGATGCCAGAGAAAGGTGAAGGAGAGAGAGACAAAGGAGAAGAGAGAGATGCGGGAGGAAGGTGACGGCGAGAGAGATGAAATTGATCGCACTAGCAAAAGCTCCAAGGCTTTACACTCCATGAGAACATGGAAAGAGAACATTGGCACTTTACTGAAATTTTAA 1473 0.442 MKYIRTNNFKRLFSFRRRSFEDQVLTRGETEEPPKRPTWKCFSYQELSDATNGFSSGDLVGKGGYAEVYKGRLEDGEEIAVKRLTRTCNDERKEKEFLTEIGTIGHVRHSNVLPLLGCCIDNGLYLVFELSSRGSVASLLHDEKAPPVDWKTRHKIALGTARGLHYLHKGCQRRIIHRDIKASNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYYMHGIVDEKTDVFAFGVILLELISGRKPVDGSHQSLHNWAQPILKRGELEKLVDPRLEGVYDVIQLNTLAFAAYLCIRASSTCRPSMSEVLEVMEDAEIDKDKWKMPEEEQEEAEHLWVLEDLEYEYDSSSSMSLPENIRNLGSSFTATVRHHKEIDFHHLRPFDLSSWLDQRFLDPLLLPPSLVDRRFTISVPHSFIISGRSLRKEEERCQRKVKERETKEKREMREEGDGERDEIDRTSKSSKALHSMRTWKENIGTLLKF 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g1458 490 FunFam Putative receptor-like serine/threonine-protein kinase 132 346 - -
Dere03g1458 490 ProSitePatterns Serine/Threonine protein kinases active-site signature. 175 187 IPR008271 GO:0004672|GO:0006468
Dere03g1458 490 ProSitePatterns Protein kinases ATP-binding region signature. 60 82 IPR017441 GO:0005524
Dere03g1458 490 FunFam Putative receptor-like serine/threonine-protein kinase 21 130 - -
Dere03g1458 490 MobiDBLite consensus disorder prediction 443 475 - -
Dere03g1458 490 SUPERFAMILY Protein kinase-like (PK-like) 39 348 IPR011009 -
Dere03g1458 490 PANTHER OS08G0249100 PROTEIN 30 351 IPR046958 -
Dere03g1458 490 Gene3D Phosphorylase Kinase; domain 1 26 130 - -
Dere03g1458 490 Gene3D Transferase(Phosphotransferase) domain 1 132 347 - -
Dere03g1458 490 SMART serkin_6 54 326 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere03g1458 490 Coils Coil 431 463 - -
Dere03g1458 490 ProSiteProfiles Protein kinase domain profile. 54 326 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere03g1458 490 Coils Coil 81 101 - -
Dere03g1458 490 Pfam Protein kinase domain 56 268 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere03g1458 Dere-ChrDere03 24114982 24119847 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere03g1458 40 322 Receptor kinase-like Gene Family AT1G60800 45.704 9.74e-73 238
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Dere03g1458 PK_Tyr_Ser-Thr 1.4e-40 CL0016