Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g1444 ATGAACGCACTACCCGGGTCGGAGACAAGATCATCTGATAAAGTCATGGATACTGATGAGGAGTTGTCAATTGTTCTTGAACTATCTAAAGATGATTTTTTCTTTGATAAGAAGAAGAAATTGCTACAAAGCAAAGGTTTTAGTCCCATGGAACGGGTATATCTCCAGGGCTCTTCAGAACCAGGTTGGATGAGCGCTACCATGAAAGTATTGATTCAAATTGCAAGAATTATACATTTGAATGAGCTGGAACTTTATTTTGCTGATGATGCGCATACAACAGTGGAATTTTACAGCCCCAGGAATGAGTTAGAGGCTCTCAATTCCATCATTTCACTCATTGACACACTACTTGCTAGTCATAAACCTCTTCATATAAGTAGACTACAAGAGTTGCGGACAACAATTCTTGGCTTAATTTCTGATTTTGGGGACAAGAACAGTATAAAAGCAGTAGTTGAAAGAGACCACCTTTCTGACCAAGAAGAAAAAGTGTTAAAATGGGGTAAAAGCAATGGTGTAAGGACACATTTGCAGATAGCATATGTCGAAGGAGCAGGTCGGGGTGCCATAGCAGAAACAGATCTTAAAGTTGGAGATATTGCTTTAGAAATTCCAGTATCCATTATCATCAGTGAAGAGATTGTGCATGAAACTGATGTGTATCGCGTCCTAATGGAGGTAGATGGCATATCATCTGAGACAATATTGCTATTATGGAGTATGAAAGAGAAGCACAATCGCAATTCAAAATTCAAAATATACTTTGACACACTCCCAGAAAGATTTAATACTGGGTTGAGCTTTGGCATTGATGCAATTACAATGTTGGAAGGAACCTTGCTCTTGGAAGAGATAATGGAAGCAAGACAGCACCTACATGCTCAATATGATGAATTGGTCCCTACTTTGTGCACTGCTTTTCCTGATATATTTCCACCAGAGCTGTACACGTGGGAGCAATTTCTATGGGCTTGTGAACTCTGGTACTCAAATAGTATGAAGATAAAGTTCTCTGATGGAACGTTAAGGACATGCTTAATTCCTATTGCTGGATTTCTTAATCATTCACTGTGCCCACACATTATGCACTATGGCAAAGTAGATACTGCTACAAATTCATTGAAATTTCGTCTATCAAGACCATGTAGATCTGGAGAAGAGTGCTGTTTAAGCTATGGGAACTTCTCTAGTTCTCATCTCATTACCTTTTACGGTTTCTTACCACAAAGAGACAACCCATATGATGTCATCCCACTAGAGATTGATGCTTCTGGCATTGATTCTACGGAGGATGAACCCATGTCCAGCTGGACCAATCACATGGTGCGGGGTACTTGGCTCTCTAACAACCACAACATGTACTATTATGGCCTCCCCTCCCCATTATTGGACCATTTTCGAAGATCAAGAAGTCCCATGCTGCAAACTAAGACCTTTTTGCAAGGGGACTTGGAAAATGAGCTGGAAATTCTAGAAGATCTCGGATGTATCTTTGATAACATGTTGGACGATATGGGTGAGATAAGTCTTGATGACAGTGAAAACTGCAATTGGGATGAAAAATTGGCACTGGAATATAAAATTCTACAAAGACGAATTGTCTCCTCTGTTACTACTTCATGCAATACTGGTTCGGACATGGCTAAGAATGAATGGTGCAAGTGCATGGCTGAGGACATCCGAGGGTAA 1692 0.4019 MNALPGSETRSSDKVMDTDEELSIVLELSKDDFFFDKKKKLLQSKGFSPMERVYLQGSSEPGWMSATMKVLIQIARIIHLNELELYFADDAHTTVEFYSPRNELEALNSIISLIDTLLASHKPLHISRLQELRTTILGLISDFGDKNSIKAVVERDHLSDQEEKVLKWGKSNGVRTHLQIAYVEGAGRGAIAETDLKVGDIALEIPVSIIISEEIVHETDVYRVLMEVDGISSETILLLWSMKEKHNRNSKFKIYFDTLPERFNTGLSFGIDAITMLEGTLLLEEIMEARQHLHAQYDELVPTLCTAFPDIFPPELYTWEQFLWACELWYSNSMKIKFSDGTLRTCLIPIAGFLNHSLCPHIMHYGKVDTATNSLKFRLSRPCRSGEECCLSYGNFSSSHLITFYGFLPQRDNPYDVIPLEIDASGIDSTEDEPMSSWTNHMVRGTWLSNNHNMYYYGLPSPLLDHFRRSRSPMLQTKTFLQGDLENELEILEDLGCIFDNMLDDMGEISLDDSENCNWDEKLALEYKILQRRIVSSVTTSCNTGSDMAKNEWCKCMAEDIRG 563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g1444 563 FunFam Transcription factor, E2F and DP-related 160 408 - -
Dere03g1444 563 Pfam SET domain 187 394 IPR001214 GO:0005515
Dere03g1444 563 Gene3D set domain protein methyltransferase, domain 1 158 408 - -
Dere03g1444 563 PANTHER UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE 159 503 - -
Dere03g1444 563 ProSiteProfiles SET domain profile. 176 394 IPR001214 GO:0005515
Dere03g1444 563 SUPERFAMILY SET domain 159 415 IPR046341 -
Dere03g1444 563 CDD SET_LSMT 178 408 - -
Dere03g1444 563 Gene3D - 17 133 IPR036464 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Dere03g1444 SET 7e-08 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere03g1444 03 23834594 23840493 Dere03g1444 03 23834594 23840493 ECH