Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g1432 ATGGGTCGAGCTCCATGCTGTGACAAGGCCAACGTGAAGAAAGGACCATGGTCCCCCGAAGAGGATGCCAAGCTCAAAGCATATATCGAAAAGTATGGAACCGGAGGCAACTGGATTGCTCTTCCCCAGAAAATTGCTCAACTTCCAGGAAGGACAGACAATGACATAAAGAACTACTGGAACACCAGGTTGAAGAAGAAGTTACTCGGAAGGCGCAAACAGTCGTCTAGCTTCAGTAATCTGAAAGACAGAAACGGAGGAAACGATGTAGTGGATTCAAGTGCCCTAAGCAACTCGGCTCTTGAAAGGCTTCAACTTCATATGCAACTTCAAAGCCTTCAAAACCAAAACCCTTTCTCTTTCTACAACAATCCTGCACTCTGGCCCACCAATAAGCTCCATCCTCTGATGTGTGGTACCTCTAATAGTAGTAACCCGGTGGTACAGAAACATGAATTCTACAAACCAACAATTCCACAAGAAGACAATGAAAAGGTCAATAGTTGTACGACTACGAAGGTTGACATGTCGGTTCCGTTCATGGCTACGGGGAACGATCCAATGGACTCCAGTAATATTGCAACAAGACTGGAAGAGGGAGTTCATGAGCAATCCAATACAGGGAATCAGCAGCTTTCTGCACTGCAAGCTGAGCTGGATGAGATTCTCAACGACAACGGAACAATGGTATATAATATGCCACAGGAACAAGATCAGATGGCTGATTTTGATTGTTTCGGAGAAATGAATGATCCGAAAGACAGCACGATGATGTGGTGGTCCAATGATTTAATGGCCAAATCAACTTCTGCCAACTCTTGGGATTCAAGTACTACAGCTCCTGTTCTTCAGCAGGAAGGGGTGTTTCGAGATAATTATGAACTGGTGGGTTATAATTTGTAG 903 0.4463 MGRAPCCDKANVKKGPWSPEEDAKLKAYIEKYGTGGNWIALPQKIAQLPGRTDNDIKNYWNTRLKKKLLGRRKQSSSFSNLKDRNGGNDVVDSSALSNSALERLQLHMQLQSLQNQNPFSFYNNPALWPTNKLHPLMCGTSNSSNPVVQKHEFYKPTIPQEDNEKVNSCTTTKVDMSVPFMATGNDPMDSSNIATRLEEGVHEQSNTGNQQLSALQAELDEILNDNGTMVYNMPQEQDQMADFDCFGEMNDPKDSTMMWWSNDLMAKSTSANSWDSSTTAPVLQQEGVFRDNYELVGYNL 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g1432 300 SUPERFAMILY Homeodomain-like 8 69 IPR009057 -
Dere03g1432 300 Gene3D - 11 69 - -
Dere03g1432 300 ProSiteProfiles Myb-like domain profile. 9 64 IPR001005 -
Dere03g1432 300 CDD SANT 16 64 IPR001005 -
Dere03g1432 300 PANTHER OS09G0431300 PROTEIN 46 280 - -
Dere03g1432 300 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 68 IPR017930 -
Dere03g1432 300 SMART sant 13 66 IPR001005 -
Dere03g1432 300 Pfam Myb-like DNA-binding domain 14 62 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere03g1432 Dere-ChrDere03 23638858 23640122 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere03g1432 1 168 MYB Transcription Factor Family AT5G57620 50.224 9.84e-59 189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Dere03g1432 Myb_DNA-binding 2.1e-11 CL0123