Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g1412 ATGCTTTCGAGATCCTGCTTAGACCTATTGAGTTTGGTGTCCGTCGATGATTACCGAGGAATGAGTCGGATTCCGAGAGTCACGACGGCACCTGGAGTTATATCAGAGTTCGAAGCCGCCGAAGACGACCGTGTCGATTCCGGGTCCGGATCCGACGACGTTGTTTCTTGCATTCCACAAGAGCGCAGGATCATTGTCGCGAACCAGTTGCCCATACGGGCTTTTCGGGATGTGAATACCAATAAATGGAATTTCGAATTGGACAGTGATAGTTTAGTCCTGCAGCTCAAAGACGGGTTCCCCTCCGACGTCGACGTTCTGTACGTTGGCTCCTTGAAGGCCGAGATCGATGCGACGGAACAAGACGAAGTGGCGCAAGTCTTGCTAGAAAAGTTCCGCTGCGTTCCAACCTTCTTGCCCACTGAAGTACAGAACAGGTTCTACCATGGCTTCTGCAAGCATTACCTTTGGCCTCTGTTTCACTACATGTTACCCATGTCGCCGAGCAACGGTGCTCGTTTCGATCGCGCGCAGTGGCAAGCTTATGTCTTGGCCAACAAAATTTTCGCGGATAAGGTAACGGAGGTGATAAACCCAGACGAGGATTACGTTTGGATCCATGACTATCATCTCATGGTCTTGCCTACACTACTAAGGAAACGGTTCCACCAGGTAAAGCTCGGATTCTTTTTGCATAGCCCATTCCCGTCTTCAGAAATCTATAGAACTATACCCGTTCGTGATGATATCCTTCGGGCCTTTCTGAATTGCGATTTAGTCGGATTCCACACGTTTGATTACGCAAGACACTTTTTGTCCTGTTGTAGCAGGATGTTGGGTCTTGATTATGAGTCCAAGAGGGGTTACATTGGACTAGATTATTACGGTCGAACCGTAACGATCAAAATCCTGCCGGTTGGAATCCACATGGGTCAACTTGAATCGGTCTTGTCATTTTCTGAGACGGCTGAGAAGATCAAGGAATTGAAGAAACGATTTGAGGGGAAAATTGTGATTTTAGGTGTGGATGATATGGATTTGTTCAAAGGTATCAGCTTGAAGTTCTTAGCAATGGGTCAACTCTTGGATGTACACGAGGAGTTAAGGGGTCGAGTTGTTTTAGTTCAGATTCTGAACCCTGCTAGGAGCAAAGGCAAAGACATTCAGGATGTGCAGAGTGAGACCAATGCTATTGCAAAGGAGATCAATGAGAAATACAGCAAACCAGGGTACCAGCCAATCATCTTCATCAACGGCACAGTTTCAACGCAGGAAAAAGCTGCTTACTATGCCATTTCTGAATGCTGCATTGTGAATGCCGTGAGAGATGGGATGAACTTGATGCCTTATACGTACACTGTTTGCAGACAGGGCACCCCTGCTTTGGACAAGGCCCTCGGAAGTGACAATGATTCGGAAAGGCCCAAACAGAGCGTCATCATTGTGTCTGAATTCATCGGATGCTCGCCGTCTCTGAGCGGCGCGATCCGGGTGAACCCGTGGAACATCGATGATGTCTCTGAGGGCATGAATTTGGCTATCACAATGCCAGAGGTAGAGAAGCATTTGCATCATAAAAAGCATTATAAGTATATAAGCTCCCATGATGTAGCTTATTGGGCTCGGAGTTTTGATCAAGACTTGGAGAGAGCAAGTAGAGACCATTATCTCAAGAGGTGTTGGGGTGTTGGCCTAGGCTTAGGGTTCAAAGTTGTGGCTCTGGATTCTACATTCAAGAAGCTTTCAATGGATAACATTGTCTCTGCGTATAGAAACACACAGAGTCGTTTGATCCTTCTGGACTATGATGGTACCATGTTGCCACAGGCATCAATAGACAAAACTCCCAGCAACGAGGTTATATCAGTCTTGAATTCTCTATGTAGTGATCCCAAAAATATAGTGTTCATTGTCAGCGGAAGAGATAAGAAGTGCCTAAGCAAGTGGTTTTCTCCATGTGAGAAGCTGGGTCTTTCAGCTGAGCATGGTTACTTCACTAGGTGGAGTAGGGATTCTCCGTGGGCGACCTGTGAATTGACGATGGACTTTGATTGGAAAAAGATTGCAGAACCTGTGATGGCGCATTACACTGAAGCAACTGATGGTTCTTGCATTGAACAAAAGGAAACCGCTTTGGTTTGGCATCATCAGGAAGCTGATCCTCACTTTGGGTCATGCCAAGCCAAAGAGCTTCTTGATCACCTCGAGAGTGTGCTTGCCAACGAACCAGTAGTTGTTAAAAGAGGACAGCATATTGTGGAAGTAAAACCTCAGGGTGTGAGCAAAGGTATGGTAGTGGAAAACCTTATCTCAAGCATGAGAAGTAGGGGAACGTCTCCAGATTTTCTGCTATGCATTGGAGATGATCGCTCAGATGAAGATATGTTTGAGAGTATTGCTTCACCAGTTTCTAACTCAACCGTTCCAGCCACAGCACAAGTCTTTGCATGTACAGTTGGTCAGAAACCAAGCATGGCGAAGTACTATCTGGATGACACTCATGAAGTCATCAAATTGCTTCGAGGACTTGCTACTACTTCAGCAGAACCCTCAAAGTCCATACATTCTCTGGAATTGCAAAGGTCTTTGTAG 2592 0.4618 MLSRSCLDLLSLVSVDDYRGMSRIPRVTTAPGVISEFEAAEDDRVDSGSGSDDVVSCIPQERRIIVANQLPIRAFRDVNTNKWNFELDSDSLVLQLKDGFPSDVDVLYVGSLKAEIDATEQDEVAQVLLEKFRCVPTFLPTEVQNRFYHGFCKHYLWPLFHYMLPMSPSNGARFDRAQWQAYVLANKIFADKVTEVINPDEDYVWIHDYHLMVLPTLLRKRFHQVKLGFFLHSPFPSSEIYRTIPVRDDILRAFLNCDLVGFHTFDYARHFLSCCSRMLGLDYESKRGYIGLDYYGRTVTIKILPVGIHMGQLESVLSFSETAEKIKELKKRFEGKIVILGVDDMDLFKGISLKFLAMGQLLDVHEELRGRVVLVQILNPARSKGKDIQDVQSETNAIAKEINEKYSKPGYQPIIFINGTVSTQEKAAYYAISECCIVNAVRDGMNLMPYTYTVCRQGTPALDKALGSDNDSERPKQSVIIVSEFIGCSPSLSGAIRVNPWNIDDVSEGMNLAITMPEVEKHLHHKKHYKYISSHDVAYWARSFDQDLERASRDHYLKRCWGVGLGLGFKVVALDSTFKKLSMDNIVSAYRNTQSRLILLDYDGTMLPQASIDKTPSNEVISVLNSLCSDPKNIVFIVSGRDKKCLSKWFSPCEKLGLSAEHGYFTRWSRDSPWATCELTMDFDWKKIAEPVMAHYTEATDGSCIEQKETALVWHHQEADPHFGSCQAKELLDHLESVLANEPVVVKRGQHIVEVKPQGVSKGMVVENLISSMRSRGTSPDFLLCIGDDRSDEDMFESIASPVSNSTVPATAQVFACTVGQKPSMAKYYLDDTHEVIKLLRGLATTSAEPSKSIHSLELQRSL 863
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g1412 863 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 595 712 - -
Dere03g1412 863 FunFam Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 725 856 - -
Dere03g1412 863 SUPERFAMILY HAD-like 596 844 IPR036412 -
Dere03g1412 863 Gene3D Glycogen Phosphorylase B; 315 533 - -
Dere03g1412 863 Gene3D Glycogen Phosphorylase B; 56 314 - -
Dere03g1412 863 Pfam Trehalose-phosphatase 599 833 IPR003337 GO:0003824|GO:0005992
Dere03g1412 863 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 55 314 - -
Dere03g1412 863 FunFam Alpha,alpha-trehalose-phosphate synthase 316 533 - -
Dere03g1412 863 NCBIfam HAD-IIB family hydrolase 597 798 IPR006379 -
Dere03g1412 863 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 27 844 IPR001830 GO:0003824|GO:0005992
Dere03g1412 863 NCBIfam trehalose-phosphatase 595 844 IPR003337 GO:0003824|GO:0005992
Dere03g1412 863 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 62 551 - -
Dere03g1412 863 CDD HAD_TPP 597 838 - -
Dere03g1412 863 Gene3D - 595 710 IPR023214 -
Dere03g1412 863 Gene3D - 725 857 IPR023214 -
Dere03g1412 863 Pfam Glycosyltransferase family 20 62 549 IPR001830 GO:0003824|GO:0005992
Dere03g1412 863 CDD GT20_TPS 62 549 IPR001830 GO:0003824|GO:0005992
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere03g1412 Dere-ChrDere03 23101390 23104187 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere03g1412 1 847 Trehalose Biosynthesis Gene Families AT2G18700 67.962 0.0 1215