Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g1392 ATGTATACTTGTTGTGCCACAGACACACAGCAGAACAAATTCCTCCCAGCGCTCGACATTTTTGGCTTTTGTAAAGCTCTGGATCACGGTCACTCAGAATTGTTATTTGGAGGGTCTTTATTTGCTGTCCTCCTCAATTGCAAGCGCTATGCTAAATCTTATTCCAGCCGTCACATTTGCAATTGCAGTATTTATAGGAATGGAGAGAGTGAACATTTGGAGCTTGAGCAGTGTAGCAAAGATAGGAGGGACTGTGATCTGTGTTCCAGCATGAGCAAGCCACCCAGATCACCTATCACTGTCAGCTTGGATGTGTTTCATGTCTACATTACAATCAGCAGCACTCATCTAGTTATTGCACATCGCAATATGATGTGTTTACAGGGAGTCATAGGATCTGCAGTGGCGTATGTTGTGCAAGCGTGGTGCATTTCACGGAGGGGTCCTCTCTTCTCTGCGATGTTCACTCCTTTGTGCACAGTAGATGTGATCGTATTTGCTGCCATATTTCTTCATGAAGAGATTTACACTGGAGGGTAA 540 0.4444 MYTCCATDTQQNKFLPALDIFGFCKALDHGHSELLFGGSLFAVLLNCKRYAKSYSSRHICNCSIYRNGESEHLELEQCSKDRRDCDLCSSMSKPPRSPITVSLDVFHVYITISSTHLVIAHRNMMCLQGVIGSAVAYVVQAWCISRRGPLFSAMFTPLCTVDVIVFAAIFLHEEIYTGG 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g1392 179 SUPERFAMILY Multidrug resistance efflux transporter EmrE 116 175 - -
Dere03g1392 179 PANTHER WAT1-RELATED PROTEIN 125 177 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere03g1392 Dere-ChrDere03 22741518 22743379 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere03g1392 126 178 Nodulin-like Gene Family AT4G30420 62.963 4.07e-17 75.9