Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g1390 ATGGGAGGATTAGAGTACTACACGCCAGTGATGGCTATGTTTCTGCTTCAGTTCACATACGCAGGTGTTTCCCTCACCACAAGAGTCGCTTTATTACAGGGCATGAGTCCTAGAGTCTTCGTATTCTATCGGCAAGCCATAGCCACTATTGTCATCGCACCCATAGCCTATTTCTCAGGAAAATCTGGCTCGTGTTCCTTAAATTTAAAGAGTTTCACCTTGATATTCTTAACCTCACTTGTTGGCATTACGATCTCTCAGAATTGTTATTTCGAGGGTCTACATCTGGTTTCCTCCTCAATTGCAAGTGCTATGCTAAATCTTGTTCCAGCCGTCACATTTGTAATTGCAGCTTTTTCAGGAATGGAAAGAGTGAATTTTAGGAGCTTGAGAAGTGTAGCGAAGATTGGAGGAACCTTTATCTGTGTAAGCGGAGCTGTATCTATAGCATTGCTAAAAGGTCCAAAGCTACTAAATGCACAGCATCTGTTGGAGTTGGGAGGTGAGAAATGGTTGCTGGGTTGGCTCTTTCTCTTTGGAAGTTGCTGTTTCTGGTCACTTTGGTTGATTTTGCAGGTTCCAGCATTAGCAAGCCACCCAGATCACCTATCATTGTCAGCTTGGATGTGTATCATGTCGACATTACAATCAGCAGTAGTTTGCCTGGTCACGGAACGAGACCCACAGACATGGAAATTGCATTCAGTTCTTGAACTGGGTTGCTGTCTATTCGCAGGAGTCATAGGATCTGCAGTATCATACTTTGTGCAAGCGTGGTGCATTTCACGAAGGGGTCCTCTCTTCTCTGCAATGTTCACTCCTGTATGTACAGTGATTGTGACCGTATTTGCTGCCTTATTTCTTCATGAAGAGATTTACACTGGAAGCTTGATAGGAGCTGTTGGAGTGATGATGGGCCTGTATGTTGTGCTGTGGGGTAAAGCTGAAGAGGTTGGTGAGGCGACAGAGGAGAAAAGGGATTCAGTATTGCAAACTGATCAAACACATGATGTGAATATATTAATAGATGAATCCTTTGAGAAAGCAAGTTGTGAAATTGATATGAAGGAACCCCTTCTTTCTACTAATTATAAGCTTACCCTTAGTTTTAAGACAAGTTTGTAA 1125 0.4276 MGGLEYYTPVMAMFLLQFTYAGVSLTTRVALLQGMSPRVFVFYRQAIATIVIAPIAYFSGKSGSCSLNLKSFTLIFLTSLVGITISQNCYFEGLHLVSSSIASAMLNLVPAVTFVIAAFSGMERVNFRSLRSVAKIGGTFICVSGAVSIALLKGPKLLNAQHLLELGGEKWLLGWLFLFGSCCFWSLWLILQVPALASHPDHLSLSAWMCIMSTLQSAVVCLVTERDPQTWKLHSVLELGCCLFAGVIGSAVSYFVQAWCISRRGPLFSAMFTPVCTVIVTVFAALFLHEEIYTGSLIGAVGVMMGLYVVLWGKAEEVGEATEEKRDSVLQTDQTHDVNILIDESFEKASCEIDMKEPLLSTNYKLTLSFKTSL 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g1390 374 Pfam EamA-like transporter family 10 130 IPR000620 GO:0016020
Dere03g1390 374 Pfam EamA-like transporter family 173 311 IPR000620 GO:0016020
Dere03g1390 374 SUPERFAMILY Multidrug resistance efflux transporter EmrE 43 148 - -
Dere03g1390 374 SUPERFAMILY Multidrug resistance efflux transporter EmrE 240 314 - -
Dere03g1390 374 PANTHER WAT1-RELATED PROTEIN 8 323 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere03g1390 Dere-ChrDere03 22722241 22724203 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere03g1390 1 363 Nodulin-like Gene Family AT4G30420 53.333 1.22e-141 405