Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g1369 ATGGCTTTCAATTGGGTCGTTCTTCTTCTACTCTTCTTTCTCTCCTGTGCTGGACTTTGTTTCTCTTCCGAGCCTCGCAACCACGAAGTGGAGGCTTTGATGAGCATAAGAGATGCTTTGAATGATCCCCATGGGGTTTTAAGCAACTGGGATGAGTACTCAGTGGACCCATGCAGTTGGGCCATGATCACTTGTTCATCTGAATCCCTTGTTGTTGGCCTGGGAGCGCCAAGCCAATCTCTCTCCGGAACTCTATCTGGAGCAATAGGAAATCTGACAAATCTTCGACAAGTCTTACTGCAGAACAACAATATCTCAGGCAAAATCCCACAGGAGCTTGGTACCCTTCCCAAGCTTGAGACTTTAGATCTTTCCAACAATCGATTCACTGGTGCAATTCCAGGGTCCCTGAGTCGGTTGAATAGTCTCCAGTACCTGAGGCTGAACAACAATAGCCTGTCTGGGCCATTCCCTGTATCACTTTCCAAAATCCCACAGCTTGCTTTCTTGGACTTGTCTTATAACAATCTCAGTGGACCATTACCAAAGTTTCCAGCCAGAACATTCAATGTTGTGGGAAACCCCTTAATTTGTGAAAGCAGCTCTACTGAAGGTTGCTCTGGATCAGCAACCCTAACACCTATTCCCTTCTCTTTAGCATTGGCACAAGGAAAGCACAAGTCCAAGAAGCTAGCAATTGCACTTGGGGTCAGTCTTAGCTTTGCTAGTATCATACTCATGTCTTTTGGGCTCTTATGGTATAGAAAGAGACAGCAGCACCGAGCCATCCTGTACATCGGGGATTATCAAGAAGAGGGACTTGCTAGCTTGGGAAATCTAAAAAATTTTACTTTTCGAGAGCTCCGACATGCTACAGATAATTTTAGCTCCAGGAACATACTTGGTGCAGGAGGTTTTGGCAATGTTTATCGTGGAAAGCTTGGAGACGGGACAATGGTGGCAGTAAAAAGGCTGAAGGATGTAACTGGAAGTGCTGGGGAATCGCAGTTTCAAACAGAACTGGAGATGATCAGCTTGGCAGTTCACCGCAATTTACTTCGCTTAATTGGATATTGTGCTACTCCTAACGAGAAGCTTCTAGTTTATCCTTATATGTGTAATGGCAGTGTGGCATCCAGGCTCAGAGGCAAACCTTCCTTGGACTGGAACACAAGAAAGAGGATTGCAATTGGAGCTGCCAGAGGTCTTCTGTATCTTCATGAGCAATGTGATCCAAAGATAATACACAGAGATGTAAAGGCAGCTAATGTGCTTCTGGATGACTATTGTGAGGCCGTGGTTGGTGATTTTGGGCTTGCAAAGCTCCTTGACCATGCTGACTCTCATGTCACCACTGCTGTCCGTGGCACTGTTGGGCACATTGCACCGGAGTACCTCTCCACTGGCCAATCATCTGAGAAAACTGATGTGTTTGGATTTGGCATTCTCTTGTTGGAGCTTATAACTGGAATGACGGCCATTGAGTTTGGGAAAACAGTTAATCAAAAAGGCGCAATGCTAGAGTGGGTGAGGAAAATACAGCATGAAAAGAAAGTTGAAGTATTGGTGGACAAAGAGTTAGGGAGCCACTATGACTGGATAGAGGTGGGGGAAATGCTGCAAGTAGCTTTACTTTGCACACAAAATTTGCCCGCTCACCGCCCTAAAATGTCTGAAGTTGTCCGAATGCTTGAAGGCGATGGCCTTGCTGAGAAATGGGCTGCATCACATAGTTATGGTTGCCTTAGCATGAACTCCATTCACAGCAACAGTAGCAATAGCTCATCATCCCGCCCTACCACCACTGCTTCAAATTCAAAACATGATGACAATGTTCATGATCGTTCCAGCTTGTTTGGCTTTGCAATGGATGATGATGATGATGGACATTCTTTGGATTCCTATGCCATGGAGCTCTCTGGTCCAAGATAA 1932 0.4555 MAFNWVVLLLLFFLSCAGLCFSSEPRNHEVEALMSIRDALNDPHGVLSNWDEYSVDPCSWAMITCSSESLVVGLGAPSQSLSGTLSGAIGNLTNLRQVLLQNNNISGKIPQELGTLPKLETLDLSNNRFTGAIPGSLSRLNSLQYLRLNNNSLSGPFPVSLSKIPQLAFLDLSYNNLSGPLPKFPARTFNVVGNPLICESSSTEGCSGSATLTPIPFSLALAQGKHKSKKLAIALGVSLSFASIILMSFGLLWYRKRQQHRAILYIGDYQEEGLASLGNLKNFTFRELRHATDNFSSRNILGAGGFGNVYRGKLGDGTMVAVKRLKDVTGSAGESQFQTELEMISLAVHRNLLRLIGYCATPNEKLLVYPYMCNGSVASRLRGKPSLDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDYCEAVVGDFGLAKLLDHADSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMTAIEFGKTVNQKGAMLEWVRKIQHEKKVEVLVDKELGSHYDWIEVGEMLQVALLCTQNLPAHRPKMSEVVRMLEGDGLAEKWAASHSYGCLSMNSIHSNSSNSSSSRPTTTASNSKHDDNVHDRSSLFGFAMDDDDDGHSLDSYAMELSGPR 643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g1369 643 FunFam Somatic embryogenesis receptor-like kinase 1 372 583 - -
Dere03g1369 643 MobiDBLite consensus disorder prediction 607 633 - -
Dere03g1369 643 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 6 575 - -
Dere03g1369 643 MobiDBLite consensus disorder prediction 588 606 - -
Dere03g1369 643 FunFam Putative LRR receptor-like serine/threonine-protein kinase 26 208 - -
Dere03g1369 643 Gene3D Phosphorylase Kinase; domain 1 267 371 - -
Dere03g1369 643 ProSiteProfiles Protein kinase domain profile. 295 580 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere03g1369 643 Pfam Leucine rich repeat N-terminal domain 27 66 IPR013210 -
Dere03g1369 643 SUPERFAMILY L domain-like 26 194 - -
Dere03g1369 643 Pfam Leucine rich repeat 117 177 IPR001611 GO:0005515
Dere03g1369 643 Pfam Protein tyrosine and serine/threonine kinase 298 564 IPR001245 GO:0004672|GO:0006468
Dere03g1369 643 FunFam Somatic embryogenesis receptor kinase 1 266 371 - -
Dere03g1369 643 Gene3D Ribonuclease Inhibitor 26 208 IPR032675 -
Dere03g1369 643 SMART serkin_6 295 564 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere03g1369 643 PRINTS Leucine-rich repeat signature 119 132 - -
Dere03g1369 643 PRINTS Leucine-rich repeat signature 164 177 - -
Dere03g1369 643 SUPERFAMILY Protein kinase-like (PK-like) 278 565 IPR011009 -
Dere03g1369 643 ProSitePatterns Serine/Threonine protein kinases active-site signature. 414 426 IPR008271 GO:0004672|GO:0006468
Dere03g1369 643 ProSitePatterns Protein kinases ATP-binding region signature. 301 323 IPR017441 GO:0005524
Dere03g1369 643 Gene3D Transferase(Phosphotransferase) domain 1 372 582 - -
Dere03g1369 643 MobiDBLite consensus disorder prediction 588 643 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere03g1369 Dere-ChrDere03 22496536 22501423 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere03g1369 6 510 Receptor kinase-like Gene Family AT2G23950 76.040 0.0 800
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Dere03g1369 PK_Tyr_Ser-Thr 8.3e-41 CL0016