Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g1326 ATGGCTGAGCGTAAGAGCTTCGAAGCTCTCGGAGACGAAAAGCCACAACTGCAAAAAGAGAACCCATCAGAAGAAGAGGAAGAGGAACAAAAGCGAGACTCTGAAGCACAGCCTTGCGAGTCGCAGGATGGTGAGTTACGGAGTTCTGAAACTCCCGATGAAACAGAGCCCAGAGAGCCTAATTTGGAAACCCTAGCTGTGCCCACTTCGCCTGTACCCGTAGAGAAGGATCAGAGTGCCGATTTGCAGGCGAGCTCTACTTCACAGGAGCCTGTAAAAGGCGAAAGTAAGGAGCCTGATGGATCTTCTGACAAGGAACTTACCAAAAAAAAAGCAGTTCAGGCAACACAATCTCAGATAGGAAATCAACATCAGGTGTCAGTTTGTTCAACTCCATTGTCTGAACTATCACCAACATCTGTTACACAATCTTTACCATCTGCTCCAAGTCCTGCTGTACCAGAACAAAGACAGTATTCTCCAAAGGTTAATAATGTAAATTTGCTGGAGGTAGACAAGAAAAGGCCTTCTTGTCGCAACACTTTATCTCCTGTTTCTGTTGTGAGGACATCTGCATCTGATGGATACAACTGGCGAAAGTATGGTCAGAAGCAAGTGAAGAGTCCTACAGGTTCTCGGAGCTATTACAGGTGTACTCATTCAGAGTGTTGTGCTAAGAAGATTGAATGCTGTGACCATTTAGGCCATGTGGTTGATGTTGTTTATAAAAGTCAACACAGCCATGATCCACCACGGAAGACTAATGCCACTAGAGAAAGTAAGCTTGTATCATCCAAACAACCTGCTGTAGAGAACAGTGTTCCAGAGCAGCCCATCAGAGTGCTCAATGATTCAAATCCATGCCCTTATTCAAAAGAACCTCCACAAGAAGCTCCATGCAGTGCTGACAAGAAACAGCAAAATTCATCTGATCTCAGTGAGAATGGTAAAGTTGACTTGAAGGAGGAGCATGTTGTTGAGCCAGAGCTGAAAAGAAGAGTTAAGAAAGGTGACTGTACATACCCAGATTCTCCAGTAAAACCCGGAAAGAAACCTAAGTTTGTTGTACATGCAGTGGGGGATGTGGGGATATCTGGCGATGGATACCGATGGCGTAAGTATGGACAGAAAATGGTGAAGGGGAATCCTCGTCCTAGAAACTACTATAGATGCACTTCTGCTGGATGTCCTGTCCGTAAGCACATTGAGACTGCCGTAGATAACTCAAATGCTGTAATCATTACATATAAGGGAGTTCATGACCATGACATGCCTGTGCCTAAGAAACGGCATGGCCCACCAAGTGCTCCTCTTGTGGCTGCTGCAGCACCTGCTTCAATGAACAATTCACAGCAGTTCAAGAAAACCGATGCACTGCAGAAGCAAAAATCTTCTACTCAGTGGTCAGTCGACACTGAGGGAGAATTAACTGGGGAAGCTATGGAACTTGGGGGTGAGAAGGCAATGGAGTCAGCTCGAACTCTCTTAAGCATTGGTTTTGAAATAAAGCCTTGCTGA 1518 0.4532 MAERKSFEALGDEKPQLQKENPSEEEEEEQKRDSEAQPCESQDGELRSSETPDETEPREPNLETLAVPTSPVPVEKDQSADLQASSTSQEPVKGESKEPDGSSDKELTKKKAVQATQSQIGNQHQVSVCSTPLSELSPTSVTQSLPSAPSPAVPEQRQYSPKVNNVNLLEVDKKRPSCRNTLSPVSVVRTSASDGYNWRKYGQKQVKSPTGSRSYYRCTHSECCAKKIECCDHLGHVVDVVYKSQHSHDPPRKTNATRESKLVSSKQPAVENSVPEQPIRVLNDSNPCPYSKEPPQEAPCSADKKQQNSSDLSENGKVDLKEEHVVEPELKRRVKKGDCTYPDSPVKPGKKPKFVVHAVGDVGISGDGYRWRKYGQKMVKGNPRPRNYYRCTSAGCPVRKHIETAVDNSNAVIITYKGVHDHDMPVPKKRHGPPSAPLVAAAAPASMNNSQQFKKTDALQKQKSSTQWSVDTEGELTGEAMELGGEKAMESARTLLSIGFEIKPC 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g1326 505 Gene3D WRKY domain 182 252 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dere03g1326 505 Gene3D WRKY domain 351 426 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dere03g1326 505 ProSiteProfiles WRKY domain profile. 193 251 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dere03g1326 505 ProSiteProfiles WRKY domain profile. 360 425 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dere03g1326 505 Pfam WRKY DNA -binding domain 194 248 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dere03g1326 505 Pfam WRKY DNA -binding domain 367 422 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dere03g1326 505 MobiDBLite consensus disorder prediction 243 317 - -
Dere03g1326 505 MobiDBLite consensus disorder prediction 93 111 - -
Dere03g1326 505 SUPERFAMILY WRKY DNA-binding domain 190 251 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dere03g1326 505 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 98 455 IPR044810 GO:0003700
Dere03g1326 505 FunFam WRKY transcription factor 353 426 - -
Dere03g1326 505 MobiDBLite consensus disorder prediction 257 272 - -
Dere03g1326 505 MobiDBLite consensus disorder prediction 1 60 - -
Dere03g1326 505 SUPERFAMILY WRKY DNA-binding domain 359 425 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dere03g1326 505 SMART WRKY_cls 365 424 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dere03g1326 505 SMART WRKY_cls 192 250 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dere03g1326 505 MobiDBLite consensus disorder prediction 1 158 - -
Dere03g1326 505 MobiDBLite consensus disorder prediction 112 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere03g1326 Dere-ChrDere03 21860937 21868372 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere03g1326 127 505 WRKY Transcription Factor Family AT4G30935 55.990 1.48e-129 383
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Dere03g1326 WRKY 6.1e-23 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere03g1326 03 21860937 21868372 Dere03g1326 03 21860937 21868372 ECH