Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g1324 ATGGGTTTGGGAGTGTTTGGTTCTATTTTAGTTCTGACCCTTTTCTTCAAGCACTTGGCGTGCCAGCAACCAAATACCGATGGGTTCTTCATGTTGGAGTTCTTCAAGAAGATGGGTTTATCTTCAACTTCTTTCCAATCCTACAACTTCTCTGGTTCTTCTTTCTGTTCATGGCAAGGGGTTCTCTGTGATGCCCAGAAAGAACATGTCGTTGAGTTCAAAGCTTCTGGGTTAGGCCTCTCTGGACCTATTCCTGATACCACCATTGGCAAGCTTAGCAAGCTTCAATCTTTGGACCTTAGCAGCAACAAAATCGCTGGGTTGCCTTCAGATTTCTGGAGTTTAACCTCCCTCAAGAGCCTTAACCTATCTTCCAACCAGATTTCTGGTTCATTACCCAACAACATTGGCAATTTTGGTTCGTTGGAAATCTTAGACTTATCGAACAACAATCTCTCTGAAGAAATTCCTGAAGCTATAGGCTCCCTTGTCAGTCTTCGTATCCTCAGACTAAGCCAGAACAGGTTCGAACAGAGCATACCTTCAGGGATTTTGAAGTGTCAGTCTCTAGTTTCAATTGATCTTTCATCAAATCAGCTAAATGGGACTCTTCCGGATGGCTTTGGTGCTTCGTTTTCAAAGCTGAAAATGTTGAACCTTGCTGGGAATAGTATTTATGGTCGAGATTCAGACTTTTCTGGGTTGAATTCCATTACTACTATCAATATATCTGGAAATTCGTTTCAGGGTTCTGCCATGGGTGTGTTTAAGGACAGCTTGGAGGTCATTGACCTTAGCAAGAACCAATTTCAGGGTCACATTTCTCAGGTACAGTTCAATTCTAACTATAATTGGTCTCGTATAGTTTATTTGGATTGGTCTGAGAATCAATTTAGTGGGGAAATTCTCCTGAATTTGAACCAAGCCCGGAATCTGAAACACCTAAATCTTGCACACAATAGATTTACCAGACAGAAATTCCCACAGATAAAAATGCTCTCTGTGTTGGAATACTTGAACTTGTCTAGAACTAGTCTTGTTGGTCACATTCCTGATGAAATCTCTCAACTGAGGCATTTGAATGCACTTGATATCTCTATGAATCATCTCACTGGGAAAATCCCCTTACTGAGGAACAAAAACCTCCAAGTTCTTGACCTTTCTATGAACAATTTGAGTGGTGAAATCCCCCAACCTGTCTTAGATAAGCTCCCACGGATGGAGAAATATAACTTCTCATATAATAACGTAACCTTCTGTGATTCAAAATTCACCCCTGAAATCCTCAAAACAGCGTTCTTGGGATCAGTTAACATATGCCCAATTGCTGCAAACCCCACACTTTTCAAAAGAAGAACCACTGAACATAAAGGAATGAAGCTGGCTCTTGCATTGACGCTAGCAATGATCTGCCTTCTTGCTGGGCTTTTGTTTCTAGCATTTGGTTGTAGAAGGAAAACAAAAATGTGGGCAGTGAAGCAAACATCATATAAGGAAGAACAGAACATCTCAGGACCTTTCGAATTCCAGACCGATTCAACAACCTGGGTGGCTGATGTCAAACAAGCAACTTTGGTCCCAGTAGTAATTTTCGAGAAGCCATTGTTGAACATCACATTCGCTGACCTCTTGTCTGCGACTTCAAACTTTGATAGGGGTACCCTTTTGGCTGAAGGGAAGTTTGGGCCTGTTTATAGAGGCTTTCTACCCGGTGGGATTCATGTAGCAGTTAAGGTTCTGGTTGTTGGATCTACATTGACGGATCAAGAAGCTGCAAGAGAGCTTGAGTATCTTGGTAGGATCAAGCACCCCAATCTTGTTCCTTTAACTGGGTATTGTCTAGCTGGAGATCAGAGGATTGCCATATATGATTACATGGAGAATGGGAACTTGCAAAACTTGCTCTATGACTTGCCGCTGGGGGTGCAAAGTACAGAAGATTGGAGCACAGACACGTGGGAGGAGGATGACAATGGTGGTGGGATTCAAAATGCTGGCTCTGAGGGATTACTCACATCTTGGAGATTTCGTCACAAGATTGCCCTTGGCACTGCTCGAGCATTGGCCTTTCTTCACCATGGCTGCTCACCTCCAATCATTCACAGAGATGTTAAGGCTAGTAGTGTCTATCTGGATTATAACCTAGAGCCGAGGTTGTCTGACTTTGGGCTGGCTAAGATTTTTGGAGATGGCTTGGATGAGGAAATTGCACGTGGTTCACCTGGTTATGTTCCACCAGAGTTTTCCAAACCTGAATACAATCCCCCAACGCCAAAATCTGATGTGTACTGTTTTGGGGTTGTGCTCTTTGAGCTAATAACTGGGAAAAAACCAGTCGGGGATGATTATCCTGATGCAAAGGAAGAAACTTTGGTTGGCTGGGTGAGAGGACTAGTGAGAAAAAACCAAGCTTCAAGAGCCATTGATCAGAAAATTCGCAATACGGGCCCAGAGGAACAGATGGAGGAGGCCCTTAAGATTGGTTATCTTTGCACGGCTGATCTTCCCTACAAGCGACCAAGCATGCAGCAGGTAGTTGGACTTCTTAAAGATATTGAGCCTTCTGCTGTTTAG 2574 0.4316 MGLGVFGSILVLTLFFKHLACQQPNTDGFFMLEFFKKMGLSSTSFQSYNFSGSSFCSWQGVLCDAQKEHVVEFKASGLGLSGPIPDTTIGKLSKLQSLDLSSNKIAGLPSDFWSLTSLKSLNLSSNQISGSLPNNIGNFGSLEILDLSNNNLSEEIPEAIGSLVSLRILRLSQNRFEQSIPSGILKCQSLVSIDLSSNQLNGTLPDGFGASFSKLKMLNLAGNSIYGRDSDFSGLNSITTINISGNSFQGSAMGVFKDSLEVIDLSKNQFQGHISQVQFNSNYNWSRIVYLDWSENQFSGEILLNLNQARNLKHLNLAHNRFTRQKFPQIKMLSVLEYLNLSRTSLVGHIPDEISQLRHLNALDISMNHLTGKIPLLRNKNLQVLDLSMNNLSGEIPQPVLDKLPRMEKYNFSYNNVTFCDSKFTPEILKTAFLGSVNICPIAANPTLFKRRTTEHKGMKLALALTLAMICLLAGLLFLAFGCRRKTKMWAVKQTSYKEEQNISGPFEFQTDSTTWVADVKQATLVPVVIFEKPLLNITFADLLSATSNFDRGTLLAEGKFGPVYRGFLPGGIHVAVKVLVVGSTLTDQEAARELEYLGRIKHPNLVPLTGYCLAGDQRIAIYDYMENGNLQNLLYDLPLGVQSTEDWSTDTWEEDDNGGGIQNAGSEGLLTSWRFRHKIALGTARALAFLHHGCSPPIIHRDVKASSVYLDYNLEPRLSDFGLAKIFGDGLDEEIARGSPGYVPPEFSKPEYNPPTPKSDVYCFGVVLFELITGKKPVGDDYPDAKEETLVGWVRGLVRKNQASRAIDQKIRNTGPEEQMEEALKIGYLCTADLPYKRPSMQQVVGLLKDIEPSAV 857
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g1324 857 SMART LRR_typ_2 333 357 IPR003591 -
Dere03g1324 857 SMART LRR_typ_2 163 187 IPR003591 -
Dere03g1324 857 SMART LRR_typ_2 188 211 IPR003591 -
Dere03g1324 857 SMART LRR_typ_2 92 114 IPR003591 -
Dere03g1324 857 SMART LRR_typ_2 139 162 IPR003591 -
Dere03g1324 857 SMART LRR_typ_2 115 138 IPR003591 -
Dere03g1324 857 ProSiteProfiles Leucine-rich repeat profile. 94 115 IPR001611 GO:0005515
Dere03g1324 857 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 109 204 - -
Dere03g1324 857 SUPERFAMILY L domain-like 53 426 - -
Dere03g1324 857 ProSiteProfiles Leucine-rich repeat profile. 117 139 IPR001611 GO:0005515
Dere03g1324 857 Pfam Leucine Rich Repeat 141 163 IPR001611 GO:0005515
Dere03g1324 857 SUPERFAMILY Protein kinase-like (PK-like) 536 850 IPR011009 -
Dere03g1324 857 FunFam Putative LRR receptor-like serine/threonine-protein kinase 511 625 - -
Dere03g1324 857 ProSiteProfiles Leucine-rich repeat profile. 141 163 IPR001611 GO:0005515
Dere03g1324 857 Gene3D Ribonuclease Inhibitor 25 185 IPR032675 -
Dere03g1324 857 Pfam Leucine Rich repeat 379 395 IPR001611 GO:0005515
Dere03g1324 857 Gene3D Phosphorylase Kinase; domain 1 510 625 - -
Dere03g1324 857 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 260 421 - -
Dere03g1324 857 FunFam Calmodulin-binding receptor kinase CaMRLK 258 376 - -
Dere03g1324 857 ProSiteProfiles Protein kinase domain profile. 550 856 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere03g1324 857 PRINTS Leucine-rich repeat signature 115 128 - -
Dere03g1324 857 PRINTS Leucine-rich repeat signature 95 108 - -
Dere03g1324 857 Gene3D Transferase(Phosphotransferase) domain 1 626 856 - -
Dere03g1324 857 Pfam Protein tyrosine and serine/threonine kinase 554 847 IPR001245 GO:0004672|GO:0006468
Dere03g1324 857 Pfam Leucine rich repeat 189 247 IPR001611 GO:0005515
Dere03g1324 857 Pfam Leucine rich repeat 84 128 IPR001611 GO:0005515
Dere03g1324 857 Pfam Leucine rich repeat 310 370 IPR001611 GO:0005515
Dere03g1324 857 Gene3D Ribonuclease Inhibitor 277 431 IPR032675 -
Dere03g1324 857 Gene3D Ribonuclease Inhibitor 187 276 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere03g1324 Dere-ChrDere03 21839444 21842017 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere03g1324 80 853 Receptor kinase-like Gene Family AT4G39400 34.221 8.10e-113 370
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-2 Dere03g1324 PK_Tyr_Ser-Thr 8.9e-33 CL0016