Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g1318 ATGACTTTGCTTCGTAAATTGTTCTTTCGTAAGCCCCCCGATGGGCTTCTTGAGATCTGTGAGAGAGTTTATGTTTTTGACTGCTGCTTCACGACGGATGCTTGGAATGAAGAAAATTATAAAGTATACATAGACGGGATTGTTAATCAACTTCGAGAGCACTTGCCTGATGCTTCGATCTTGGTCTTCAATTTCCGTGAGGAAGAAACTAAGAGTCAGATGGCTAACATCTTGTCCGAGTATGACATGACCATTATGGACTACCCTCGGCAATATGAGGGCTGCCCAGTGCTCAAAATGGAGGTCATCCACCACTTTTTACGGTCGGGTGAAAGTTGGCTCTCACTTGGGCAGCAAAATGTGCTGTTGATGCATTGTGAACGTGGTGGTTGGCCGGTTCTGGCTTTCATGCTGGCTGCACTGCTAATTTATCGGAAGCAATATAGTGGAGAACAACGGACTTTGGATATGGTTTACAGGCAAGCTCCACGTGAGCTTTTGCATTTGTTGACACCATTAAATCCTATTCCTTCCCAACTGCGGTATCTGCAGTATGTTTCAAGGAGGAATGTGGCCATAGATTGGCCTCCATTGGACAGGGCACTAACGTTGGATTGCATCATTCTCAGATTCATCCCAAACTTTGATGGGGAAGGTGGATGTTGTCCAATGTTTCGAATATATGGACAGGATCCCTTTCTAGCAGATAAAACTCCAAAAATCCTGTACTCAACACCAAAGAAAAACAAAACTGTCCGAGCTTACAAGCAGGGAGAGTGTGAACTAATTAAAATTGATATCAACTGCCATATCCAAGGTGATGTTGTGATTGAGAGCATCAACTTGAACAGTGATATGGACCGTGAAGGGATGATGTTTCGAGTCATGTTCAACACAGCTTTTATTAGGTCTAATATTTTGATGCTTAACCGGGATGAAGTAGACATTTTATGGGATACTAAAGATCACTTTCCCAAGGATTTCAGAGCTGAGATTCTTTTCTCAGAGATGGATGCTGCTGCTGCTGTAATTGCGTATGGTACCTCGTGCTTTGAGGAGAAGGAGGGACTGCCAATTGAAGCATTTGCCAAAGTTCAGGAGATCTTTAACCATGTGGACTGGTTAAATCCTAGGGCAGATGTTGCTTTAAACGTCCTCCAGCAGATGAGTGCTTCAGCTATCATGCATGACAAAATTGATACAAGTTTTGCCCAGCATGCAGATAAAGGATCTTTATTGCACGAAACAGGTCCCAAAGTGCCCCAGGGGGAAAAAAATGAAACAACATCCTCAACTAAGCTATCCTTGGATAATGATATGAGTAAAAAAGGGGATGTGCCTGTCAAGATTGGTGGTACTCCAAAACTACCTGGTAGTTCTGACATCTGTCAGAAGATTCCCAATGCTTCTGTGAGAACCTCAGAGTCCAGTAAATATGTAACAAGTTCTGCAAAGCTTGATGGAAAGCCACAGGTGGATGATCTTGCCCTATCTGGATCTGTTGATAGTTATAGTGTATCACTTTCTCCAAGAACACCTCCACTGCATCCTTCCGTAATTAGTAAATCTAAGAAAGCACCTCCTCATCATCTTTCTTCTTCAGAACCAGTTTATCCTGTTACTAAAGAAACTGAAGCCCATTCACAAGACAGAAGTCAGTCATCTATTTTAAGCTCTGTATCTGGAACTCCATTATCAAATACCTTTCCAAATAAGTTGCCTCCTGATGCTGCTTCCCATCCTTCAGCTTCAGCAATGACTTCAACTCAGCCACCTCCTCCCCCTACATTCCCTACCAAGGAGATTCTATCTGTTAGAACTCTACCTGCTTCATCCACTTCTCATCCTACTCCACCTACTCCCCCCAAACCCCCAACTCCGCCAACCCCTCCTCAAAAGGAGCATAAACTGATTAGAGCTGTGCCTCCTCCACCTCCACCTCCACCACAGAAGGAGCAACCATTGGTTAGAGCCATGTCTCCTCCACCTCCTCCAAATGAGGAACCGCAAGGTCGACTTGCACCCCCTCCCACCCCACCACCTCCTCTAAGGGAGGAGCCACATGTTAGACCTGGACCACCTCCTCCACCCCCACCTCCTCGAAAGGAGGAGCTACCTGTTACAGCTAGACCTCCTCCTCCTCCACCTCTTCCACGTCCTTCTGCAAAAGCTGTGGACCCTAACATAGCACCACCACCTCCTCCTCCTCCTCCTACTGCAGCGCTTTCCTCCAAGCAGCCTAATTCTCCATCACAGAATTCTTCACCTGTTCCTGCTGCTCCTAATGCTCCGCCACCTCCAGCGCCCTTTGGCAAAGGAGGTCTAAAATCAGGGAATAATTATTCAGGATCTCGCCCAGTAGGTGGTGATGGAAGCATGTCAAGTACAACAGGACCTCGAGGACGAATTCTGTTACGTACAATAAGTAGTTCAAAAACTCAAAATAAAAAGTTGAAGCCATTGCATTGGCTAAAAATATCTAGAGCAGTACAAGGAAGTTTGTGGGCCGAGGCACAGAAATCTGGCGAAGCTTCCAAGGCACCAGAGATTGATATGTCTGAGCTTGAGAGTCTCTTCTCAGCAGCAGTCCCAAGTTCTAAGAAATTAGGTGCCAGCAGCTCAGTTGGGCCTAAATCTGATAAAGTGCAACTGATTGAGCACAGGCGAGCATATAATTGTGAAATTATGCTTTCAAAAGTGAAAGTGCCATTGCATGATTTGATGAGCTCGGTGCTAGCACTAGAAGACTCAGCACTAGACATTGATCAGGTTGAAAACCTCATAAAGTTTTGTCCCACGAAAGAGGAGATGGAATTACTCAAGGGTTATACTGGAGAAAAGGAGAAGTTAGGGAGATGTGAACAGTTCTTCCTAGAGCTGATGAAAGTACCACGAGTGGAATCGAAGCTCAGAGTGTTTTCATTTAAGATTCAATTCCAATCTCAGGTTTCTGACCTTAGAAAAAGCCTGAATATTGTGAATGCTGCTGTTGAAGAGATTAGGAATTCTGTCAAATTGAAGAGAATTATGCAAACCGTACTTTCTTTGGGAAATGCTTTGAACCAAGGAACTGCCAGGGGTTCTGCTATTGGATTCAGATTGGATAGCCTTCTTAAACTAACTGAGACGCGTGCACGGAACAACAAGATGACTCTCATGCATTATCTTTGTAAGGTGTTGGCTGACAAATTACCAGAAGTTCTAGACTTCTCTGAGGATCTTGCTAACATGGAGCCTGCAGCAAAGATCCAATTGAAGTTTTTGGCAGAGGAGATGCAAGCTATAAGCAAGGGATTAGAGAAAGTTATCCAGGAACTTTCAACCTCTGAAAATGATGGCCCTATATCAGAAACATTCCGTAAGAATTTGAAAGATTTCCTCTGTTCTGCTGAAGCTGAAGTCCGATCATTGGCTTCATTATATTCTGGCGTGGGTAGGAACGTGGACGCATTGATTCTTTATTTTGGTGAAGATCCAGCTCGCTGCCCTTTCGAGCAAGTTGTTACTACTTTGCTCAACTTCACGAGAATGTTCAACAAAGCCCATGGAGAAAACTGCAAACAGCTTGAGCTTGAAATGAAGAAAGCAGCTGATAGTGAGAAAAAGATATGTGAATCAGAAAGGATATTACGTACTGTAATCAGGACTGGCAATGTCAAGTGA 3663 0.4425 MTLLRKLFFRKPPDGLLEICERVYVFDCCFTTDAWNEENYKVYIDGIVNQLREHLPDASILVFNFREEETKSQMANILSEYDMTIMDYPRQYEGCPVLKMEVIHHFLRSGESWLSLGQQNVLLMHCERGGWPVLAFMLAALLIYRKQYSGEQRTLDMVYRQAPRELLHLLTPLNPIPSQLRYLQYVSRRNVAIDWPPLDRALTLDCIILRFIPNFDGEGGCCPMFRIYGQDPFLADKTPKILYSTPKKNKTVRAYKQGECELIKIDINCHIQGDVVIESINLNSDMDREGMMFRVMFNTAFIRSNILMLNRDEVDILWDTKDHFPKDFRAEILFSEMDAAAAVIAYGTSCFEEKEGLPIEAFAKVQEIFNHVDWLNPRADVALNVLQQMSASAIMHDKIDTSFAQHADKGSLLHETGPKVPQGEKNETTSSTKLSLDNDMSKKGDVPVKIGGTPKLPGSSDICQKIPNASVRTSESSKYVTSSAKLDGKPQVDDLALSGSVDSYSVSLSPRTPPLHPSVISKSKKAPPHHLSSSEPVYPVTKETEAHSQDRSQSSILSSVSGTPLSNTFPNKLPPDAASHPSASAMTSTQPPPPPTFPTKEILSVRTLPASSTSHPTPPTPPKPPTPPTPPQKEHKLIRAVPPPPPPPPQKEQPLVRAMSPPPPPNEEPQGRLAPPPTPPPPLREEPHVRPGPPPPPPPPRKEELPVTARPPPPPPLPRPSAKAVDPNIAPPPPPPPPTAALSSKQPNSPSQNSSPVPAAPNAPPPPAPFGKGGLKSGNNYSGSRPVGGDGSMSSTTGPRGRILLRTISSSKTQNKKLKPLHWLKISRAVQGSLWAEAQKSGEASKAPEIDMSELESLFSAAVPSSKKLGASSSVGPKSDKVQLIEHRRAYNCEIMLSKVKVPLHDLMSSVLALEDSALDIDQVENLIKFCPTKEEMELLKGYTGEKEKLGRCEQFFLELMKVPRVESKLRVFSFKIQFQSQVSDLRKSLNIVNAAVEEIRNSVKLKRIMQTVLSLGNALNQGTARGSAIGFRLDSLLKLTETRARNNKMTLMHYLCKVLADKLPEVLDFSEDLANMEPAAKIQLKFLAEEMQAISKGLEKVIQELSTSENDGPISETFRKNLKDFLCSAEAEVRSLASLYSGVGRNVDALILYFGEDPARCPFEQVVTTLLNFTRMFNKAHGENCKQLELEMKKAADSEKKICESERILRTVIRTGNVK 1220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g1318 1220 Coils Coil 1179 1199 - -
Dere03g1318 1220 MobiDBLite consensus disorder prediction 463 484 - -
Dere03g1318 1220 PANTHER FORMIN-J 1 683 - -
Dere03g1318 1220 MobiDBLite consensus disorder prediction 757 771 - -
Dere03g1318 1220 Pfam Formin Homology 2 Domain 810 1178 IPR015425 -
Dere03g1318 1220 MobiDBLite consensus disorder prediction 422 437 - -
Dere03g1318 1220 Gene3D - 198 340 - -
Dere03g1318 1220 SMART it6_source 808 1215 IPR015425 -
Dere03g1318 1220 MobiDBLite consensus disorder prediction 498 516 - -
Dere03g1318 1220 MobiDBLite consensus disorder prediction 614 743 - -
Dere03g1318 1220 MobiDBLite consensus disorder prediction 550 573 - -
Dere03g1318 1220 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 12 187 IPR029021 -
Dere03g1318 1220 Pfam C2 domain of PTEN tumour-suppressor protein 200 336 IPR014020 -
Dere03g1318 1220 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 201 337 IPR035892 -
Dere03g1318 1220 ProSiteProfiles C2 tensin-type domain profile. 199 337 IPR014020 -
Dere03g1318 1220 Gene3D Formin, FH2 domain 806 1189 IPR042201 -
Dere03g1318 1220 SUPERFAMILY Formin homology 2 domain (FH2 domain) 880 1198 - -
Dere03g1318 1220 ProSiteProfiles Formin homology-2 (FH2) domain profile. 808 1204 IPR015425 -
Dere03g1318 1220 MobiDBLite consensus disorder prediction 777 801 - -
Dere03g1318 1220 MobiDBLite consensus disorder prediction 412 801 - -
Dere03g1318 1220 SMART PTEN_C2_2 197 336 IPR014020 -
Dere03g1318 1220 Gene3D Protein tyrosine phosphatase superfamily 15 197 IPR029021 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere03g1318 Dere-ChrDere03 21721104 21730341 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere03g1318 1 400 Protein tyrosine phosphatase (PTP) family AT5G58160 69.825 0.0 634