Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g1315 ATGATGGGTGACAAAACCAGAGATTCTTGTCATTCGTCTTTGCTCCATGGTAAGTACGAGCTCGGTCGCCTTCTGGGTCACGGCACTTTCGCCAAAGTCTATCACGCGAAGAACTTGCAGAGCGGGAAGAGCGTGGCCCTGAAGGTGGTGGGCAAAGAGAAAGTGATAAAAGTGGGCATGATGGAACAGATTAAGAGGGAAATTTCCGTTATGAAGATGGTGAAGCATCCCAACATCGTTGAGCTCTATGAGGTTATGGCCAGCAAATCCAAGATCTATATCGCCATGGAGCTCGTTCGAGGCGGCGAGCTCTTCAACAAGATCGCCAGAGGCCGCTTGAGGGAGGACGTGGCAAGAGTGTATTTCCAGCAATTGATATCCGCCATCGATTTCTGCCACAGCCGCGGTGTTTACCACCGCGATCTCAAGCCGGAAAATCTGCTTCTCGATGAAGATGGGAACTTGAAAGTCACTGATTTCGGCCTCAGCACGTTCGCCGAGCACTTGCGGCAAGATGGGTTGCTTCACACGACTTGTGGTACTCCGGCTTACGTGGCGCCGGAGGTAATCGGGAAGAAAGGCTACGACGGTGCCAAGGCCGATATCTGGTCTTGTGGGGTCATCCTCTATGTGCTTCTCGCCGGATTCTTACCCTTCCAGGACGATAACCTGATGGCTATGTACAGAAAAATCTACAGGGGTGACTTCAAATGCCCGCCGTGGTTCTCCTCCGATTCCCGCCGGCTGATCACGAAGCTTCTCGACCCGAATCCGAATACCCGAATCACGATTTCCAAAATCATGGACTCGTCCTGGTTCAAGAAGTCTATCCCCAAGAGCGTGATAACGAAGAAGGAACAGGAATTCGATTTCGACTGCGAGGAATCGAAGCAGCAGCAGCCGGCGACGATGAACGCGTTCCATATAATTTCACTGTCGGAGGGGTTCGATTTGTCTCCATTGTTCGAGGAGAAGAAGAGGGAGGAAAAGGAGGAGCTGAGATTCGCGACAACGAGGCCGGCGAGCAGCGTGATATCGAGGCTGGAAGAGGTGGCGAAGGCGGAGAGGTTCAACGTGAAGAAGAGCGACACGAAAGTGAGGCTGCAGAGGCAGGAATGCGGAAGAAAGGGGAAGCTGGCGATCGCGGCGGATATATACGCGGTGGCGCCTTCGTTTCTGGTGGTGGAGGTGAAGAAGGACAACGGTGATACCTTGGAGTACAACCAATTCTGCAGCAAAGAACTTCGACCTGCGCTCAAAGACATCCTGTGGACGTCGCCGGCCGAAAACTCCACGCCTGCTTGA 1305 0.531 MMGDKTRDSCHSSLLHGKYELGRLLGHGTFAKVYHAKNLQSGKSVALKVVGKEKVIKVGMMEQIKREISVMKMVKHPNIVELYEVMASKSKIYIAMELVRGGELFNKIARGRLREDVARVYFQQLISAIDFCHSRGVYHRDLKPENLLLDEDGNLKVTDFGLSTFAEHLRQDGLLHTTCGTPAYVAPEVIGKKGYDGAKADIWSCGVILYVLLAGFLPFQDDNLMAMYRKIYRGDFKCPPWFSSDSRRLITKLLDPNPNTRITISKIMDSSWFKKSIPKSVITKKEQEFDFDCEESKQQQPATMNAFHIISLSEGFDLSPLFEEKKREEKEELRFATTRPASSVISRLEEVAKAERFNVKKSDTKVRLQRQECGRKGKLAIAADIYAVAPSFLVVEVKKDNGDTLEYNQFCSKELRPALKDILWTSPAENSTPA 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g1315 434 Gene3D Transferase(Phosphotransferase) domain 1 101 279 - -
Dere03g1315 434 ProSitePatterns Protein kinases ATP-binding region signature. 25 52 IPR017441 GO:0005524
Dere03g1315 434 ProSiteProfiles Protein kinase domain profile. 19 273 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere03g1315 434 Pfam NAF domain 301 361 IPR004041 GO:0007165
Dere03g1315 434 CDD CIPK_C 305 420 - -
Dere03g1315 434 FunFam Non-specific serine/threonine protein kinase 10 98 - -
Dere03g1315 434 Gene3D Kinase associated domain 1, KA1 298 425 - -
Dere03g1315 434 ProSitePatterns Serine/Threonine protein kinases active-site signature. 137 149 IPR008271 GO:0004672|GO:0006468
Dere03g1315 434 FunFam Non-specific serine/threonine protein kinase 9 300 - -
Dere03g1315 434 Gene3D Phosphorylase Kinase; domain 1 16 100 - -
Dere03g1315 434 ProSiteProfiles NAF domain profile. 299 323 IPR018451 GO:0007165
Dere03g1315 434 Pfam Protein kinase domain 19 273 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere03g1315 434 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 7 421 - -
Dere03g1315 434 SUPERFAMILY Protein kinase-like (PK-like) 16 289 IPR011009 -
Dere03g1315 434 CDD STKc_SnRK3 18 272 - -
Dere03g1315 434 SMART serkin_6 19 273 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere03g1315 434 FunFam Non-specific serine/threonine protein kinase 299 424 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere03g1315 Dere-ChrDere03 21656110 21657414 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere03g1315 12 434 CBL-interacting serine-threonine protein kinases AT4G30960 77.030 0.0 656
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Dere03g1315 Pkinase 1.5e-74 CL0016