Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g1302 ATGGCTGTTCTATACTACTGTCGTCTGGTTTCTCTTTCATCAATTCCCTTATCAGTTTTCGAACTGATATCAGTAGGAGAAGAAGATGTAGCGGTACCTGCAGAGGCTTCAGCACCCCTGGGTGAGGCTATGGACATCATGACTGCCTTACAGCTTGTGCTGAGGAAGTCACTAGTTCATGGGGGGCTTGCACGAGGACTCCATGAAGGTGCCAAGGTGATTGAAAAGCATGCTGCACATCTCTGCGTGCTGGCTAAGGACTGTGATCAGCCAGATTATGTTAAACTGCTCAAGGCACTTTGTGCTGATCATAATGTGAAGTTAATGACGGTTGCTAGTGCTAAAACACTTGGCGAATGGGCTGGTGTAAGTGGTGATATACTTCTGGTTCTTTTCATTTGTGTTGCCTGA 411 0.4647 MAVLYYCRLVSLSSIPLSVFELISVGEEDVAVPAEASAPLGEAMDIMTALQLVLRKSLVHGGLARGLHEGAKVIEKHAAHLCVLAKDCDQPDYVKLLKALCADHNVKLMTVASAKTLGEWAGVSGDILLVLFICVA 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g1302 136 Gene3D - 28 129 IPR029064 -
Dere03g1302 136 SUPERFAMILY L30e-like 41 130 IPR029064 -
Dere03g1302 136 ProSitePatterns Ribosomal protein S12e signature. 49 67 IPR000530 GO:0003735|GO:0005840|GO:0006412
Dere03g1302 136 Pfam Ribosomal protein L7Ae/L30e/S12e/Gadd45 family 49 124 IPR004038 -
Dere03g1302 136 PRINTS Ribosomal protein S12E family signature 53 66 IPR000530 GO:0003735|GO:0005840|GO:0006412
Dere03g1302 136 PRINTS Ribosomal protein S12E family signature 108 129 IPR000530 GO:0003735|GO:0005840|GO:0006412
Dere03g1302 136 PRINTS Ribosomal protein S12E family signature 67 83 IPR000530 GO:0003735|GO:0005840|GO:0006412
Dere03g1302 136 PANTHER 40S RIBOSOMAL PROTEIN S12 33 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere03g1302 Dere-ChrDere03 21461323 21462482 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere03g1302 42 123 Cytoplasmic Ribosomal Protein Gene Family AT2G32060 70.732 4.38e-39 127