Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g1296 ATGAGAAATGCCCAACAAATTCTTCATCATGTGAATGTCTCTCTTCATGATGGCAGTGCACTGGTGTTAACAGGCACGAATGGCTCAGGGAAGACAACCTTCCTGCGCATGTTCGCTGGATTTTCTCGTCCTTCTGCTGGTGAAATCCTTTGGAATGGCCATGACATTACACAATCTGGAATCTTTCATCAGTATAAGCTTCAGCTCAACTGGCTTTCCCTCAAGGATGCCATTAAAGAGAAGTTTACAGTTCTTGACAATGTTCAATGGTTTGAAGTTCTTGAAGGCAAGCAAGGGAAGTCTATGCCTGCACTTGAATTGATGGGTTATGGAAGATTGGCTAATGAGAAGGCAAGGATGCTGTCAATGGGGCAGCGAAAAAGACTGCAACTTGCTAGATTGCTGGCAATTGATCGCCCAATATGGCTGCTTGACGAGCCTTCAGTTGCATTAGATGATGACGGGGTGAAGTTACTTGAGTATATAATTGCAGAACACAGAAAGAGGGGTGGGATTGTGATTGTGGCAACTCATTTACCCATCAAGATTGAAGATGGCATGTTCTTGAGGCTGCCTCCAAGGTTTCCGAGGTGGATGACCCTAGTGGATATGCTTGATTGTGCTGATATTTAG 633 0.4455 MRNAQQILHHVNVSLHDGSALVLTGTNGSGKTTFLRMFAGFSRPSAGEILWNGHDITQSGIFHQYKLQLNWLSLKDAIKEKFTVLDNVQWFEVLEGKQGKSMPALELMGYGRLANEKARMLSMGQRKRLQLARLLAIDRPIWLLDEPSVALDDDGVKLLEYIIAEHRKRGGIVIVATHLPIKIEDGMFLRLPPRFPRWMTLVDMLDCADI 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g1296 210 Pfam ABC transporter 8 148 IPR003439 GO:0005524
Dere03g1296 210 PANTHER ABC TRANSPORTER I FAMILY MEMBER 1 1 205 IPR005895 GO:0017004|GO:0022857
Dere03g1296 210 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1 210 IPR003439 GO:0005524
Dere03g1296 210 NCBIfam heme ABC exporter ATP-binding protein CcmA 2 185 IPR005895 GO:0017004|GO:0022857
Dere03g1296 210 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 3 178 IPR027417 -
Dere03g1296 210 Gene3D - 2 187 IPR027417 -
Dere03g1296 210 SMART AAA_5 17 203 IPR003593 GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere03g1296 Dere-ChrDere03 21312666 21313298 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere03g1296 6 160 Calmodulin-binding Proteins AT2G36910 27.485 3.40e-12 63.2