Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g1290 ATGGAAAAGAACAGGACTCATGCAGGCCCTGAATGGAAGCGTTCTATACTCTCCTTGTTTCTCCTCCCCACTGCGGCACTCTACAGCTGCGACGGCGACGGTAGTTTTCACGCTTGTATACTGATATGCGATTCTTTCTCAGTTAGGTTGGTCTTGATCATGGATGCTTCGATTGCTTTGAAGCTCTTCCCTGATTTATCATTGTATTTCTGTTTTGGATTGATATCTTATTTTTTTTCGGTTGAGATGGCAATGGATGCATTGTGTCTTTCCCTTTTCAAGCATGGCGTCTTAAAGCCTCCACTTCCACGTCTCCTCCTTAACAACGTTTCTTGCATGAGAAATGCCCAACAAATTCTTCATCACGTGAATGTCTCTCTTCATGATGGCAGCGCACTGGTGTTAACAGGCACGAATGGCTCAGGGAAGACAACCTTCCTGCGCATGTTAGCTGGATTTTCTCGTCCTTCTGCTGGTGAAATCCTTTGGAATGGCCATGACATTACACAATCTGGAATCTTTCATCAGTATAAGCTTCAGCTCAACTGGCTTTCCCTCAAGGATGCCATTAAAGAGAAGTTTACAGTTCTTGACAATGTTCAATGGTTTGAAGTTCTTGAAGGCAAGCAAGGGAAGTCTATGCCTGCACTTGAATTGATGGGTCTTGGAAGATTGGCTAATGAGAAGGCAAGGATGCTGTCAATGGGGCAGCGAAAAAGACTGCAACTTGCCAGATTGCTGGCAATTGATCGCCCAATATGGCTGCTTGACGAGCCTTCTGTTGCATTAGATGATGACGGGGTGAAGTTACTTGAGTATGTAATTGCAGAACACAGAAAGAGGGGTGGGATTGTGATTGTGGCAACTCATTTACCCATCAAGATTGAAGCTGGCATGTTCTTGAGGCTGCCTCCAAGGTTTCCGAGGAGGATGACCCTAGTGGATATGCTTGATCGTGCTGATATTTAG 969 0.451 MEKNRTHAGPEWKRSILSLFLLPTAALYSCDGDGSFHACILICDSFSVRLVLIMDASIALKLFPDLSLYFCFGLISYFFSVEMAMDALCLSLFKHGVLKPPLPRLLLNNVSCMRNAQQILHHVNVSLHDGSALVLTGTNGSGKTTFLRMLAGFSRPSAGEILWNGHDITQSGIFHQYKLQLNWLSLKDAIKEKFTVLDNVQWFEVLEGKQGKSMPALELMGLGRLANEKARMLSMGQRKRLQLARLLAIDRPIWLLDEPSVALDDDGVKLLEYVIAEHRKRGGIVIVATHLPIKIEAGMFLRLPPRFPRRMTLVDMLDRADI 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g1290 322 Pfam ABC transporter 120 260 IPR003439 GO:0005524
Dere03g1290 322 SMART AAA_5 129 317 IPR003593 GO:0016887
Dere03g1290 322 Gene3D - 103 299 IPR027417 -
Dere03g1290 322 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 102 290 IPR027417 -
Dere03g1290 322 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 30 - -
Dere03g1290 322 PANTHER ABC TRANSPORTER I FAMILY MEMBER 1 100 317 IPR005895 GO:0017004|GO:0022857
Dere03g1290 322 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 105 322 IPR003439 GO:0005524
Dere03g1290 322 NCBIfam heme ABC exporter ATP-binding protein CcmA 107 296 IPR005895 GO:0017004|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere03g1290 Dere-ChrDere03 21121544 21124583 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere03g1290 118 272 Calmodulin-binding Proteins AT2G36910 27.485 3.36e-11 62.4