Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g1279 ATGGCTTCCCCTCCGGTGAATTCTTTACCCGTAGCGTACCAGGCATGGACGAGTCTGGCAGTAACAGATTGGCTGAACAAAGGGGACAACGCGTGGCAGATGATCTCTGCGACTCCGGTGGGCATACAGAACATGCCAGGGCTCGTAATTATCTACGGGTGCATCGTGAAGAAGAAATGGGCTGTGAACTCTGCTTTCATGGTGCTCTACGCTTTCGCGGCGGTAAGCATATGCTCGGTCACGTGGGCCTACAAGATGTCCTTCGGCGAGAAGTTGTTGCCCTTCTGGGGGAAAGCCGGGCCGGCGTTGGGGCAGAAGTTCCTGCTGAAGCAGGCGATGCTGCCGGCGACGCCTCATTACTATAAGAGCGGCGCGCTGGAGACTGCGGAGATCGAGCCGTTCTATCCGATGGTGTCGATGGTGTGGTTTCAGTGCGTGTTCGCGGTGGTTCTGCTGGCGGGATCGGTGCTGGCGAGGATGAACTTCAAGGCGTTGATGATGTTTGTACCCTTGTGGCTCACGTTCTCTTACATGGTGGGTGCGTTCAGCTTGTGGGGTGGTGGTTTCTTTTCCACTGGGGCGTCATGGACTACTCCAGTGGTTATGTCATTCATCTTTCTTTTTGGATCGCTGGATTCACCGCTGCTTATTGGACTTCACTAG 663 0.5505 MASPPVNSLPVAYQAWTSLAVTDWLNKGDNAWQMISATPVGIQNMPGLVIIYGCIVKKKWAVNSAFMVLYAFAAVSICSVTWAYKMSFGEKLLPFWGKAGPALGQKFLLKQAMLPATPHYYKSGALETAEIEPFYPMVSMVWFQCVFAVVLLAGSVLARMNFKALMMFVPLWLTFSYMVGAFSLWGGGFFSTGASWTTPVVMSFIFLFGSLDSPLLIGLH 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g1279 220 Pfam Ammonium Transporter Family 31 195 IPR024041 GO:0008519|GO:0016020|GO:0072488
Dere03g1279 220 PANTHER AMMONIUM TRANSPORTER MEP2 16 191 IPR001905 GO:0008519|GO:0016020|GO:0072488
Dere03g1279 220 Gene3D Ammonium transporter AmtB like domains 11 212 IPR029020 -
Dere03g1279 220 SUPERFAMILY Ammonium transporter 24 191 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere03g1279 Dere-ChrDere03 20955010 20955672 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere03g1279 137 190 Inorganic Solute Cotransporters AT2G38290 63.158 1.36e-15 72.8