Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g1269 ATGGCTTCCAAGCAGCCCTTCCTTCTCTTCTCTATTCTCCTTCTCCAATCTCACCTTTCAGCTTCACAAAGTTGGATCAAAGCTGGTTACTGGTATGCTGGCAGTGAATCCCCCATACCTGACATAAACTCTGCTTTGTTCACACATCTTATATGCGCCTTCGCTAATGTCAATTCCTCCACCTACGAGCTTTCCATCCTCAAATCTGAAGAACAATACTTCTCCGGCTTCACTGACATCGTCAGGCGCAAGAACCCCTCGATTGTCACCCTTATTTCTATATGGAATGGACAGGCTGAAACCGCACAGGGCATTTTGGGTAAGAAGGCAAACGATTCGGTCCTTTCTTCGATGCTTAGAAACTCTTCTTTCAGGAAGTCTTTCATTGAGTCCTCAATACAAACAGCTAGGCGATATGGGTTTCAGGGAATAGACTTGTTTTGGCTTTGGCCTCAGACGGGTTCGGATATGGCTAACTTGGGAATTCTGCTTAATGAGTGGCGACGTGCTGTGGATTCTGAGACTAGAAGCTCTGGAGAATCCCCATTGATATTGAGTATGGCCCTTCATTACTTGCCTACTGTTTTTGGGAATTTGAGTTACCCAGTTGATTCTCTGAAAAGGAATTTGGATTGGGGTCACGTTGTGGCATATGATTATCATCTTCCTTCACTGGAAAATTTCACGCATGCTCATGCTGCTCTGTATGACCCTCAGAGCCATGTCAATACTGATTTTGGTATAAGGGAATGGTTGAATAGTGGATTTCCTTCTAACAATCTGCTTTTGGGATTGCCTTACCATGGCTACGCTTGGGCATTGCATAGTCCCAAGGAAAGTGCTATTGGTGCACCCTCGTCGGGTCTGGCTGTGACACAAGATGGGTCTATGAGCTATAAGTACATCAAGTGGTATGTTCGGAGTTATGGTGCTTCTACGTCGTACAATGCTACCTATGTCGTGAATTATTGCATCATTGGTTCCATTTGGATCAACTTTGATGATGTTGAAGCTATCAGAACTAAGATTGCTTATGCCAAGGAAAAGAAGCTGTTGGGTTACAATGTGTTTCAGGTGATCAATGATGATAATTGGGTGCTTTCTGAGGCAGCTCAAGATGAAGAAACTGATCATGGAAGCAAACAGAAGCTATTGCTTATTATTTTACTTCCAGTTGCAATTATCTTAGTGATTGGAGTCTCCCTTCTATGCTGCTTTAGAAGCAGTGCATTCAAATCGAAAGTGAAGATGGTGTACGGTAAAAGCTGCCTATCTGAACCAAAAGATCTCATGTCAAGTGCAGAGAACTTTGAAAACAATCCACTTGAAGAATTTAGCTTAGCCATCATAAGAGCAGCAACAAAAGACTTTTCTGTTGAAAACAAGCTAGGAGAGGGTGGATATGGCCCTGTCTACAAGGGAAAACTACCAGGAGGACGAGAAATCGCAGTTAAGAGACTTTCAAAAGCTTCTACACAAGGACACGAAGAATTTACAAATGAAGTTTCGCTTACTGCAAGGCTTCAGCATGTCAATCTGACTAGAGTATTGGGATTCTGCATTGAGAGGGAAGAAAAAATGCTAATCTATCAGTACATGCCTAACAGAAGCTTGGATTTCTACCTCTACGATCCAATAAGAAGGTATGTATTGGACTGGAGAAAGCGTGTTAATATCATTGAAGGTATTATTCAAGGACTCGTATATCTACAAGAGTATTCAAACTTCACAATAATTCACCGAGATTTGAAAGCTAGTAACATCTTACTTGATGATAAGATGAATCCCAAGATATCAGATTTTGGGATGGCTAAACTTTTTAGAAAAGAAGAACTTGAAGCAAATACTGGACGAATTGTTGGGACATATGGTTATGTTCCTCCAGAATATGTTAAAAAAGGCACATACTCTATGAAGTATGATGTTTATAGCTTTGGAGTACTACTTTTGCAAATCATAAGTGGTAAGAGGAATACTTGCTATTATGGCACGCATGAAAACTTGAGCATTCTTGAATATGCTTATGATTTGTGGAAAGAAGGTAAAGGTTTGGAATTCGTTGATCCATCTCTTGATGATTCATCTTCTTCCTGCAAACTTCTGCGGTGTTTGCACGTGGCCCTACTGTGTGTGCAGGAAAATCCAGTAGAAAGGCCATCAATGTTGGAGATTTCTTCCATACTGAAGAATGACATTGAGGCAATTCCTTTGCCTAAAAGACCAGCTTTCTCAACAAAAAGTGATAAAAACTTAGAAGATACATCTTCATCACAGCAAGGAACTTGTTCCATAAATGATGCTTCAATTACCGAAGTAACTGCCAGATAA 2328 0.4089 MASKQPFLLFSILLLQSHLSASQSWIKAGYWYAGSESPIPDINSALFTHLICAFANVNSSTYELSILKSEEQYFSGFTDIVRRKNPSIVTLISIWNGQAETAQGILGKKANDSVLSSMLRNSSFRKSFIESSIQTARRYGFQGIDLFWLWPQTGSDMANLGILLNEWRRAVDSETRSSGESPLILSMALHYLPTVFGNLSYPVDSLKRNLDWGHVVAYDYHLPSLENFTHAHAALYDPQSHVNTDFGIREWLNSGFPSNNLLLGLPYHGYAWALHSPKESAIGAPSSGLAVTQDGSMSYKYIKWYVRSYGASTSYNATYVVNYCIIGSIWINFDDVEAIRTKIAYAKEKKLLGYNVFQVINDDNWVLSEAAQDEETDHGSKQKLLLIILLPVAIILVIGVSLLCCFRSSAFKSKVKMVYGKSCLSEPKDLMSSAENFENNPLEEFSLAIIRAATKDFSVENKLGEGGYGPVYKGKLPGGREIAVKRLSKASTQGHEEFTNEVSLTARLQHVNLTRVLGFCIEREEKMLIYQYMPNRSLDFYLYDPIRRYVLDWRKRVNIIEGIIQGLVYLQEYSNFTIIHRDLKASNILLDDKMNPKISDFGMAKLFRKEELEANTGRIVGTYGYVPPEYVKKGTYSMKYDVYSFGVLLLQIISGKRNTCYYGTHENLSILEYAYDLWKEGKGLEFVDPSLDDSSSSCKLLRCLHVALLCVQENPVERPSMLEISSILKNDIEAIPLPKRPAFSTKSDKNLEDTSSSQQGTCSINDASITEVTAR 775
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g1269 775 FunFam Uncharacterized protein 432 532 - -
Dere03g1269 775 MobiDBLite consensus disorder prediction 740 775 - -
Dere03g1269 775 Gene3D Phosphorylase Kinase; domain 1 420 532 - -
Dere03g1269 775 ProSiteProfiles Protein kinase domain profile. 457 743 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere03g1269 775 Gene3D Glycosidases 41 364 - -
Dere03g1269 775 Gene3D Transferase(Phosphotransferase) domain 1 533 736 - -
Dere03g1269 775 CDD GH18_plant_chitinase_class_V 23 368 - -
Dere03g1269 775 ProSitePatterns Serine/Threonine protein kinases active-site signature. 578 590 IPR008271 GO:0004672|GO:0006468
Dere03g1269 775 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 364 772 - -
Dere03g1269 775 SUPERFAMILY (Trans)glycosidases 26 376 IPR017853 -
Dere03g1269 775 FunFam Chitotriosidase-1 267 333 - -
Dere03g1269 775 Coils Coil 769 775 - -
Dere03g1269 775 SMART serkin_6 457 727 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere03g1269 775 FunFam Uncharacterized protein 533 737 - -
Dere03g1269 775 Gene3D - 267 333 IPR029070 -
Dere03g1269 775 Pfam Protein kinase domain 458 724 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere03g1269 775 Pfam Glycosyl hydrolases family 18 29 359 IPR001223 GO:0005975
Dere03g1269 775 SUPERFAMILY Protein kinase-like (PK-like) 442 750 IPR011009 -
Dere03g1269 775 SMART 2g34 25 362 IPR011583 GO:0008061
Dere03g1269 775 MobiDBLite consensus disorder prediction 748 775 - -
Dere03g1269 775 SUPERFAMILY Chitinase insertion domain 268 333 IPR029070 -
Dere03g1269 775 ProSiteProfiles Glycosyl hydrolases family 18 (GH18) domain profile. 25 378 IPR001223 GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere03g1269 Dere-ChrDere03 20769749 20774365 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere03g1269 444 775 Receptor kinase-like Gene Family AT4G23290 52.493 2.02e-116 365
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Dere03g1269 Glyco_hydro_18 3e-59 CL0058