Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g1252 ATGGCGTTTGACCAAAATTCCATCCCAAATGATCTGAGGCCATTAAATGTAGCTCGAACTATATCTGATGAACCTCTCATTGTACCGGCGACCACCACGGGTCGAACGGCAGAATGCTTTCCTCCAACTCCAGCTCGTGAGGCCGGTAGCCCAGGGGCTGTGCCCATTTTTTATCCTGCACCTGTATCCGATGCTGGGCTTGTTGGCCTGGGATATGGAACTATCTCATCGGGTGCTGCTACCTGGTGCGTTCGTCCAGGTGTGCCGATTGTGCATCCGACTATGAATCCTACTGTTGGGTTTAATTATAGTCCTAATTTTGGCAATCGGATTACGGGCGGCAATGCTGTTGACCTTTCAAGCAACGTCGTGGCAAATGGATCTGGTTATGCCCCGATTTCGGGAAACTGGGTTGGGGCCAATAGCTTGAATAAGGCTGGAAATGATGCAGCTAATGGGTTTTGTTCTAGTTCTGTTCAGGGCGGTAGAATCATTGGTAATGCCGTTGCCAGTGATCAGGTTGGCAGTATTGCATCAACTGGGTTTGGTTATAGCTCTCCTGCTTGCCAGCGGCAGGCTGGGAACGGGGCTGATCTTGCAAGTGATGAGGGTGGCGATGATTCTGTGTCAGGGAGAAAAGTGAAGTTTTTATGCAGTTACGGTGGAAAGATTATACCTAGACCTAGTGATGGGATGTTGAGATATGTTGGAGGGCAGACAAGAATAATTAGTGTTAAGAGAGATGTGAGCTTCAATGAACTGATGCAAAAGATGGTTGATACATATGGCCAACCTGTGGTTATCAAGTATCAGCTCCCTGAAGAGGATCTTGATGCATTGGTGTCAGTTTCGTGCCCAGATGATCTTGAAAATATGATGGATGAGTATGAGAAATTAATTGAAAGATCTTCAGATGGTTCAGCTAAACTAAGGATTTTTCTGTTTTCTGCATCAGAGCTTGATTCTCCTGGTGGGGTACAGTTAGGAGATTTACATGATAGTGGGCAGAGATACGTTGAGGCTGTGAATGGAATCACAGATGGTATTGGTTGTCGTCTCACAAGGAAAGGGAGTATCACAAGTGCAACCTCAACCCAAAATTCAGATTTCAGTGGGGCAGAGGCTCTTGATATCTTGATTGCTAGTCCAGGGGATACAAGTGTAGCACCGTCATCTTGCATGTTATCACCCAGAGGTAATGTGGTAGCCCCTCATGACACTGCTGCAAAATTTGTGGTGGCAGACCACAGTCCAAGAGTTTACGCAGAGGCTTCTGCAGTTCCAGTGGGCATACCAGTGGCTATGTCTTCTGGTCCAACTCACACTTCACCTATCCAGAATGAGATTGAATTAGAAAGGCCTGTGCCTATTACTTTACAGCAACAGCAAATTGGGTTGCAGCAATCTGGAATGGACATTCCACCACCCGCACCTTATTTGCATCCTTTTGTTGATTCACGCCAGGATGTTATGAGTCATGCAGACTATGTCCAGCTGACTCCTCAGGCAGGGTTTCCAAATTCTCAGCTTTTAGGGAAGCAAGGGCCTGCATTCACCCAACAGCAATTCCATGATGATATTCCACCCTTTGTGCCCCATCAGATCATCCCCGCTGTGCACATGACAATGACTCCCCCAACTTCTCATGTTAGTGTAAGACCAAATGTTCTTCAACCATTGATGCAACCCCAGCAAAATCGTTTGGATCAATATAATGATGAAAGTACTTCAGGGCCAAGGATCATCCAGCTTCCTGTTGAACAAAGCTTCAATGGTTACCAGGTTCAATTTCCTTCTGTTGTGGTTCCTGGTAATTACGGTTGGGTTCCGATTCCGCCACAAGAGCCTGTTATTTTCTCTGATGGATTGTTACCTCAACAACAGGTGAGGATCCCTGAGAAAATCCAAAGAGTGGAAGACTGTTATATGTGTCAGAAATTATTGCCACATGCACATTCGGAGCCTGTGGTTCAGGATCAACTGGATAGTAGTGCAAGTTCAATTTCTGATTCAGTCCTTAGTTATCATAGTCTCCCTATGGAGGAAAACTTAAAAGCTCAAGCTACAAGTAGGGTGATGGTGACTGCACCCTTGAAGGAAGGTACAATTGAACAAGGGGCTGAGACCAAATCCAGAGTCATTAGCAAGGTTGAACCTCCCATTAGTGTACCTTGCACTAATACAACTGGTGTTTCTCATAAGCTCGAGCCACTGCCTGAAGTTGGGAGGAATGTTATACAAAAGCCAGATGGTTTTGATCATCCAAGGAATCTGATAAACCAGGATATGATTGGAAAGGCAGTAGATATCCAGTCGCTGTCTGATGGGCTCACAGGCACAGTACCACTGTCTTGCCTAGATGACGTTGTTAACAAACACATGGTGCCAGCAGAAAACTGGGTTAAACAGGATGTGCTTACAAATAAACCTGTTTATAGTGATATAACTCCAGTTGGTGGCACAGTCATACAAACTTCACAGTCTGTTGTTCAAGAACCCTCAAAAGAGTATACAAATGAAATTGTTAGCATCGTCTCCAGGCCAGTGGAATGTAGTCAGATGGCACAACCGCCTGCTTGGGACATCTCTGGATCAAATCCTCAGTCAAAGAGTGGCAACCTTCTCAAGGATGATAATCCACCATCTTTAATATCTCCATCTGTCAGGTCTGGAGATGTGCAGAATTCTTCAAACTCACTTTTCAGTAACCAGGATCCCTGGAATGTACACCATAGTACCTACTTTCCTCCTCCAAGACCTAACAAAATTCGTTCTAAGGATCACTTTGGTGAGGAATTGACAGGCAACTCTGGGGAACAAAATTTAGAAGCTCAATTGGAGGATGGTCTTTACCAGCCATTTAAACAGAATTCAAATTTAGAACATGGTCAGTCAGCCAAGGGCTCAGCTGAAGACCAGATCAAACAAGAACTTCAAGCTGTTGCTGAAGGTGTAGCTGCTTCTGTTCTGCACTCAAGCACTCCTTCTAATCCTGACTTGCATGCTAGAGAAGTGTCTAGTAGTGAAGACACTGGAGATGGTGATGATCTAAGTACAGCTAAAGCTTCGGATGTCAAGAGCAAGCTACCAGAAAAGGCAAATTTTGGGTTCCCTTTATCAGATGGTCTTGGTGGATTGCAGATTATAAAGAATTGTGACCTTGAAGAGCTGAGAGAATTAGGTTCAGGTACCTTTGGGACTGTATATCATGGAAAGTGGAGGGGCACTGATGTTGCAATCAAGCGAATTAATGACAGGTGCTTTGCTGGAAAGCCTTCTGAGCAAGAGCGCATGAGAACTGACTTCTGGAATGAAGCAATCAAACTTGCTGACTTGCACCATCCAAATGTTGTAGCCTTCTATGGTGTTGTGCTCGATGGGCTAGGAGGCTCTGTGGCAACAGTAACAGAGTTTATGGTTAATGGTTCTCTTAGAAATGCCTTGCAGAAAAGTGAGAGAAATCTGGACAAGCGCAAGCGACTTCTGATTGCAATGGATGTGGCATTTGGTATGGAATACCTGCACGGAAAAAATATAGTACACTTCGACCTGAAGAGTGACAACTTGCTTGTGAATCTCCGGGATCCACACCGCCCAATATGCAAGGTTGGTGATTTGGGTCTATCCAAGGTGAAGTGTCAGACACTGATCTCTGGTGGTGTGCGAGGAACACTGCCTTGGATGGCTCCAGAACTATTGAATGGAAGCAGTAGCCTTGTTTCAGAGAAGGTTGATGTGTTTTCATACGGTATTGTGCTGTGGGAAGTCCTTACTGGAGAGGAGCCATACGCTGATTTGCACTATGGCGCAATTATAGGTGGTATCGTAAGCAACACTTTGCGGCCTCTGGTTCCAGAATCTTGTGATCCTGAATGGAGATCACTGATGGAGAGGTGCTGGTCGTCTGAGCCATCAGAGAGACCAAGCTTTACGGAGATTGCAAACGAACTACGCTCCATGGCGGCTAAGTTTCCTCCCAAAGGACAAGGTCAACAGCAGCTACCTTCTTCATTGCAGCCTCAAGTACTGAAATAA 4035 0.4543 MAFDQNSIPNDLRPLNVARTISDEPLIVPATTTGRTAECFPPTPAREAGSPGAVPIFYPAPVSDAGLVGLGYGTISSGAATWCVRPGVPIVHPTMNPTVGFNYSPNFGNRITGGNAVDLSSNVVANGSGYAPISGNWVGANSLNKAGNDAANGFCSSSVQGGRIIGNAVASDQVGSIASTGFGYSSPACQRQAGNGADLASDEGGDDSVSGRKVKFLCSYGGKIIPRPSDGMLRYVGGQTRIISVKRDVSFNELMQKMVDTYGQPVVIKYQLPEEDLDALVSVSCPDDLENMMDEYEKLIERSSDGSAKLRIFLFSASELDSPGGVQLGDLHDSGQRYVEAVNGITDGIGCRLTRKGSITSATSTQNSDFSGAEALDILIASPGDTSVAPSSCMLSPRGNVVAPHDTAAKFVVADHSPRVYAEASAVPVGIPVAMSSGPTHTSPIQNEIELERPVPITLQQQQIGLQQSGMDIPPPAPYLHPFVDSRQDVMSHADYVQLTPQAGFPNSQLLGKQGPAFTQQQFHDDIPPFVPHQIIPAVHMTMTPPTSHVSVRPNVLQPLMQPQQNRLDQYNDESTSGPRIIQLPVEQSFNGYQVQFPSVVVPGNYGWVPIPPQEPVIFSDGLLPQQQVRIPEKIQRVEDCYMCQKLLPHAHSEPVVQDQLDSSASSISDSVLSYHSLPMEENLKAQATSRVMVTAPLKEGTIEQGAETKSRVISKVEPPISVPCTNTTGVSHKLEPLPEVGRNVIQKPDGFDHPRNLINQDMIGKAVDIQSLSDGLTGTVPLSCLDDVVNKHMVPAENWVKQDVLTNKPVYSDITPVGGTVIQTSQSVVQEPSKEYTNEIVSIVSRPVECSQMAQPPAWDISGSNPQSKSGNLLKDDNPPSLISPSVRSGDVQNSSNSLFSNQDPWNVHHSTYFPPPRPNKIRSKDHFGEELTGNSGEQNLEAQLEDGLYQPFKQNSNLEHGQSAKGSAEDQIKQELQAVAEGVAASVLHSSTPSNPDLHAREVSSSEDTGDGDDLSTAKASDVKSKLPEKANFGFPLSDGLGGLQIIKNCDLEELRELGSGTFGTVYHGKWRGTDVAIKRINDRCFAGKPSEQERMRTDFWNEAIKLADLHHPNVVAFYGVVLDGLGGSVATVTEFMVNGSLRNALQKSERNLDKRKRLLIAMDVAFGMEYLHGKNIVHFDLKSDNLLVNLRDPHRPICKVGDLGLSKVKCQTLISGGVRGTLPWMAPELLNGSSSLVSEKVDVFSYGIVLWEVLTGEEPYADLHYGAIIGGIVSNTLRPLVPESCDPEWRSLMERCWSSEPSERPSFTEIANELRSMAAKFPPKGQGQQQLPSSLQPQVLK 1344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g1252 1344 Gene3D - 234 317 - -
Dere03g1252 1344 CDD PB1_UP2 217 315 - -
Dere03g1252 1344 MobiDBLite consensus disorder prediction 991 1025 - -
Dere03g1252 1344 MobiDBLite consensus disorder prediction 1003 1025 - -
Dere03g1252 1344 Pfam Protein tyrosine and serine/threonine kinase 1055 1317 IPR001245 GO:0004672|GO:0006468
Dere03g1252 1344 PRINTS Tyrosine kinase catalytic domain signature 1173 1191 IPR001245 GO:0004672|GO:0006468
Dere03g1252 1344 PRINTS Tyrosine kinase catalytic domain signature 1288 1310 IPR001245 GO:0004672|GO:0006468
Dere03g1252 1344 PRINTS Tyrosine kinase catalytic domain signature 1136 1149 IPR001245 GO:0004672|GO:0006468
Dere03g1252 1344 PRINTS Tyrosine kinase catalytic domain signature 1244 1266 IPR001245 GO:0004672|GO:0006468
Dere03g1252 1344 MobiDBLite consensus disorder prediction 1329 1344 - -
Dere03g1252 1344 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 233 317 - -
Dere03g1252 1344 SMART PB1_new 228 317 IPR000270 GO:0005515
Dere03g1252 1344 MobiDBLite consensus disorder prediction 856 936 - -
Dere03g1252 1344 SUPERFAMILY CAD & PB1 domains 229 319 - -
Dere03g1252 1344 SUPERFAMILY Protein kinase-like (PK-like) 1050 1316 IPR011009 -
Dere03g1252 1344 Gene3D Phosphorylase Kinase; domain 1 1047 1141 - -
Dere03g1252 1344 MobiDBLite consensus disorder prediction 1321 1344 - -
Dere03g1252 1344 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 1142 1333 - -
Dere03g1252 1344 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 1047 1141 - -
Dere03g1252 1344 Pfam PB1 domain 233 316 IPR000270 GO:0005515
Dere03g1252 1344 SMART serkin_6 1054 1325 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere03g1252 1344 Gene3D Transferase(Phosphotransferase) domain 1 1142 1339 - -
Dere03g1252 1344 PANTHER SERINE-THREONINE PROTEIN KINASE 255 1319 - -
Dere03g1252 1344 MobiDBLite consensus disorder prediction 858 910 - -
Dere03g1252 1344 ProSitePatterns Protein kinases ATP-binding region signature. 1060 1091 IPR017441 GO:0005524
Dere03g1252 1344 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1179 1191 IPR008271 GO:0004672|GO:0006468
Dere03g1252 1344 ProSiteProfiles Protein kinase domain profile. 1054 1324 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere03g1252 1344 CDD STKc_MAP3K-like 1060 1317 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere03g1252 Dere-ChrDere03 20491813 20498870 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere03g1252 140 1337 MAP Kinase Kinase Kinase AT3G46920 45.159 0.0 910
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Dere03g1252 PK_Tyr_Ser-Thr 2.6e-59 CL0016