Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g1145 ATGGGCAGTTACGAAAACGCCGTCGTGAGCGGCGGCGACGGCATCGCCGATGTCGACAAGGGTGTGGATTTTGCACAGTATTTCTGCACCTATGCTTTCCTGTACCATCAGAAGGAGATGCTCTCTGACCGCGTTCGCATGGACGCATACTATAATGCAATTTTTGAGAACAAACATCACTTCAGTGGCAAGACTGTTTTGGATGTGGGGACTGGAAGTGGCATACTTGCTATATGGTCAGCCCAAGCTGGTGCAAGAAAGGTCTATGCAGTGGAAGCAACTAAGATGTCAGAACATGCTCGTGCTCTTGTCAAAGCAAATAATCTCCAACATGTGGTTGAAGTCATTGAGGGCTCAATGGAAGAAGTTACTTTGCCAGAGAAAGTTGATGTGATAATATCTGAGTGGATGGGTTATTTTCTCCTTCGTGAATCTATGTTTGATTCAGTTATATGTGCTCGGGACCGCTGGCTCAAACCAACAGGCGTGATGTATCCTAGTCATGCACGCATGTGGATTGCACCTGTCAGGACTGAAATAGGAGATCACAAAATGGATGATTACCAGTTGGCTATGGATGATTGGCACAACTTTATTGATGAAACGAAAACTTATTATGGTGTTGATATGCATGTTCTAACAAAGCCTTTCTCTGAGGAGCAGAGGAAATACTATCTACAAACATCAATGTGGAACAACCTTCATCCACATCAAGTCATAGGAACTGCTGCTATAATAAAGGAGATTGATAGTTTGACTGCCACAGTGACTGATATAAGGAAAGTCAGATCAAAATTTTCTTTGTCAATAACATCAGAAATTACAAAGTTGTGTGGCTTTGGAGGGTGGTTTGATGTGCAATTTCGGGGAAGAAGTGAGGATCCAGCTGAACGTGAGATTGAGTTAACTACAGCTCCTAGTATAGATTACGGTACACACTGGGGCCAACAGGTTTTCCTCTTGCATCCTCCTACTCGTGTCAGTAAAGGTGATAATTTGAGTGTTTCTTTCTTAATGTATCGTTCAAAGGAAAACCATCGTCTGATGGAGGTTGAGCTTGGGTGTGAGATTCAACAGCATTCTGGCAAGCTTCTTGCGCCTTTCAAAAATAAGTACTACGTTGAATGA 1128 0.4309 MGSYENAVVSGGDGIADVDKGVDFAQYFCTYAFLYHQKEMLSDRVRMDAYYNAIFENKHHFSGKTVLDVGTGSGILAIWSAQAGARKVYAVEATKMSEHARALVKANNLQHVVEVIEGSMEEVTLPEKVDVIISEWMGYFLLRESMFDSVICARDRWLKPTGVMYPSHARMWIAPVRTEIGDHKMDDYQLAMDDWHNFIDETKTYYGVDMHVLTKPFSEEQRKYYLQTSMWNNLHPHQVIGTAAIIKEIDSLTATVTDIRKVRSKFSLSITSEITKLCGFGGWFDVQFRGRSEDPAEREIELTTAPSIDYGTHWGQQVFLLHPPTRVSKGDNLSVSFLMYRSKENHRLMEVELGCEIQQHSGKLLAPFKNKYYVE 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g1145 375 FunFam Protein arginine N-methyltransferase PRMT10 168 375 - -
Dere03g1145 375 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 25 359 IPR025799 GO:0016274|GO:0018216
Dere03g1145 375 Gene3D Vaccinia Virus protein VP39 22 166 IPR029063 -
Dere03g1145 375 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 31 359 IPR029063 -
Dere03g1145 375 FunFam Protein arginine N-methyltransferase PRMT10 21 166 - -
Dere03g1145 375 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 21 352 IPR025799 GO:0016274|GO:0018216
Dere03g1145 375 CDD AdoMet_MTases 65 165 - -
Dere03g1145 375 Gene3D - 168 375 - -
Dere03g1145 375 Pfam Ribosomal protein L11 methyltransferase (PrmA) 62 135 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere03g1145 Dere-ChrDere03 18491136 18495072 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere03g1145 26 334 C2H2 Transcription Factor Family AT3G12270 32.000 4.49e-39 145