Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g1140 ATGGAGGAGGAGCTGTTGTCCTGGATTAAGCTTCTTGCTCTCTGTTTCATGGCTCTACTGTGTGTGCTCAAGCTTGGAGTTGTGCTCTGGTGGCGACCCAGAAAAATCCAACTCCATTTCTCCAAGCAGGGAATCAGAGGACCCCCTTACAGGTTCTTCATTGGCAATGTCAGAGAACTCGTCGCCATGATGCTTCGAGCATCCTCCCAACCCATGCCTTTCTCTCACAACATTCTGCCTCGCGTCCTCTCCTTCTACCACCACTGGAAGAAAATTTACGGTGCAACATTCCTGGTATGGTTCGGACCCACGGTGCGGCTCACAGTGTCTGATCCGGACCTCATAAGGGAAATCTTCAGCTCCAAGTCAGAATGGTATGAGAAGAACGAAGCCCCCCCGCTGGTGAAGCAGCTCGAAGGCGATGGACTACTCAGCCTGAAAGGCGAGAAATGGGCTCACCACAGGAAAATCATCTCCCCGACCTTTCACATGGAAAATCTCAAACTGTTAATACCGGTGATGGAGACAAGCGTGGTAGAGATGTTGGAGAAGTGGCGGGCAATGTCGGAGGAGGGTGAGGTGGAAATCGAAGTGCTGGAGTGGTTCCAGAATCTCACAGAAGATGTCATTACGAGGACGGCATTTGGAAGCAGCTACGAAGATGGTAAAGCCATTTTCAGACTCCAGGCCCACCAAATGCTTCTCGCTGCCGATGCCTTCCAAAAAGTTTTCATCCCTGGTTACAGATTCTTCCCCACAAGGAGGAATATAAGGTCGTGGAAGCTGGACAAGGAGATGAAGAGATCGCTGGTGAAGGTGATCGAGAGGAGGAAGGAGAGTGATGGAGCGGAGGGAGCGAAAGGAGGGGCGAAGGATTTGCTGGGGCTGATGATTCAGGCTTCGAAATCCAAATGCTCACAGGATCACGATGTGACGGTGGAGGACATAGTGGAGGAATGCAAGAGCTTCTTCTTCGCCGGCAAACACACCACCTCCAACCTCCTCACCTGGACCACCATCCTCCTCGCTATGCACCCTCACTGGCAGCTCCAGGCACGTGACGAAGTCCTCTCCCTCTGCGGATCACGTGACCCCCCCTCCCAGGACCACGTCCCCAAGCTCAGGACGCTGAGCATGATTGTGAATGAATCTCTGAGGCTGTACCCGCCAACGATCGCCACGATCAGACGAGCGAAGAGGGATGTGGAGTTAGGGGGCTACAAGATCCCACGTGGCACGGAGCTCCTGATTCCAATCCTAGCCGTCCATCACGATCAGGCTATATGGGGGAACGATGCGAACGAGTTCAACCCGGGGCGTTTCGCGGAGGGGGTGGCACGTGCTGCCAAGCATCCCGTGGGATTTATACCCTTCGGTCTAGGCGTGCGCACGTGCATAGGACAAAACCTCGCCGTTTTGCAAACAAAACTCGCTCTCGCCATAATACTACAGCGTTTTAGCTTCAGCCTGTCCCCGAGTTATCAGCACGCACCCACCGTTCTCATGCTTCTCTATCCTCAACACGGTGCTCCAATCATCTTTCGACGGCTGTCCACGGTTCGCGATGAAGGGTCCTGA 1578 0.538 MEEELLSWIKLLALCFMALLCVLKLGVVLWWRPRKIQLHFSKQGIRGPPYRFFIGNVRELVAMMLRASSQPMPFSHNILPRVLSFYHHWKKIYGATFLVWFGPTVRLTVSDPDLIREIFSSKSEWYEKNEAPPLVKQLEGDGLLSLKGEKWAHHRKIISPTFHMENLKLLIPVMETSVVEMLEKWRAMSEEGEVEIEVLEWFQNLTEDVITRTAFGSSYEDGKAIFRLQAHQMLLAADAFQKVFIPGYRFFPTRRNIRSWKLDKEMKRSLVKVIERRKESDGAEGAKGGAKDLLGLMIQASKSKCSQDHDVTVEDIVEECKSFFFAGKHTTSNLLTWTTILLAMHPHWQLQARDEVLSLCGSRDPPSQDHVPKLRTLSMIVNESLRLYPPTIATIRRAKRDVELGGYKIPRGTELLIPILAVHHDQAIWGNDANEFNPGRFAEGVARAAKHPVGFIPFGLGVRTCIGQNLAVLQTKLALAIILQRFSFSLSPSYQHAPTVLMLLYPQHGAPIIFRRLSTVRDEGS 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g1140 525 PRINTS P450 superfamily signature 379 390 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere03g1140 525 PRINTS P450 superfamily signature 465 476 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere03g1140 525 PRINTS P450 superfamily signature 326 343 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere03g1140 525 PRINTS P450 superfamily signature 456 465 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere03g1140 525 Pfam Cytochrome P450 83 497 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere03g1140 525 Gene3D Cytochrome P450 30 521 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere03g1140 525 PANTHER CYTOCHROME P450 FAMILY MEMBER 23 510 - -
Dere03g1140 525 CDD CYP734 83 511 - -
Dere03g1140 525 SUPERFAMILY Cytochrome P450 39 516 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere03g1140 525 PRINTS E-class P450 group I signature 90 109 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere03g1140 525 PRINTS E-class P450 group I signature 465 488 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere03g1140 525 PRINTS E-class P450 group I signature 335 361 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere03g1140 525 PRINTS E-class P450 group I signature 205 223 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere03g1140 525 PRINTS E-class P450 group I signature 315 332 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere03g1140 525 PRINTS E-class P450 group I signature 455 465 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere03g1140 525 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 458 467 IPR017972 GO:0005506|GO:0016705
Dere03g1140 525 FunFam Cytochrome P450 734A1 30 518 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere03g1140 Dere-ChrDere03 18412252 18415262 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere03g1140 1 522 Cytochrome P450 AT2G26710 76.181 0.0 832
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere14g0279 14 2868528 2872111 Dere03g1140 03 18412252 18415262 CCT
Dere03g1140 03 18412252 18415262 Dere03g1140 03 18412252 18415262 ECH