Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g1135 ATGGTGGGAAGCAGAGACAGAGGGGTGTTTAGAATGACGATGTGCGGGCAAGAAAATATTGATTTGTCCAGAGATGGAAGTCAATACAGTCTGTCCACAGGGATATTACCTTCCCTCGGCGCTAGAAGCAACCGAAGAGTCAAGCTTCGACCCTTCATTATCTCTCCCTATGACCGACGTTACAGGATATGGGAGACTTTTCTGATTATTCTGGTGATATATACAGCATGGGTTTCACCATTTGAATTTGGATTCCTCAAGAAACCAGAAGGACCACTCTCCATTACAGACAACGTTGTCAATGGATTCTTCGCAATCGACATAGTTTTAACCTTTTTTGTGGCTTACCTGGACAAAACTAGCTACTTATTAGTGGATAGCAGAAAACAAATTGCCTGGAAATACGCACGTTCTTGGTTAGTCTTGGATGTTATCTCCACAATCCCTTCTGAACTCGCTCGGAAAATATCCCCTTCATCCCTCCGATCATATGGACTCTTCAATATGCTTCGCCTATGGCGCCTCCGAAGAGTCAGTGCTCTGTTTTCTAGATTGGAGAAGGACAAGAATTATAACTATTTTTGGGTTCGGTGTGCTAAGCTTATATGTGTTACTCTTTTTGCTGTTCATTGTGCTGGATGCTTCTATTATCTTATTGCTGCGCGGTATCATGATCCGAAAAAGACGTGGATAGGAGCAACAATGGGGAATTTTCTTGAAGAGAGCTTGTGGACAAGATATGTGACATCTATGTATTGGTCTATTACAACCTTAACAACTGTCGGTTATGGAGATCTGCATCCGGTGAATTCAAGGGAGATGATCTTTGACATCTTCTACATGCTATTCAACCTAGGATTAACCGCCTATTTGATTGGTAACATGACCAATTTGGTCGTCCATGGCACAAGTCGAACTAGGAAATTTAGGGATACCATACAAGCTGCCTCAAGTTTTGCTCAGAGGAACCAATTGCCTGGTCGTCTACAAGACCAGATGCTTGCACATTTGTGTCTGAAGTTCAGAACAGACTCAGAGGGGTTACAGCAGCAAGAGACACTTGACTCTCTTCCTAAAGCTATCAAATCAAGCATTTCTCATTATCTTTTCTACTCTTTGGTGGACAAGGTCTATTTGTTTCGTGGAGTCTCAAATGACTTGCTTTTCCAATTGGTCTCAGAGATGAAAGCTGAGTATTTTCCTCCAAAGGAAGATGTCATTTTGCAAAATGAAGCGCCCACAGATTTTTATATTCTAGTAACTGGAGCTGTGGAGCTGCTAGTTTTGAAAAATGGGGTAGAGCAGGTGGTGGGAGAGGCAGCAACTGGTGATCTGTGCGGAGAGATAGGAGTGCTCTGTTATAGGCCGCAGCTTTTCACTGTGCGAACTAAGCGATTGAGTCAGCTTCTGAGGCTGAACCGTACGACCTTCTTGAACATTGTTCAGGCTAACGTGGGAGATGGCACCATAATCATGAACAATCTCCTTCAGCATTTGAACGAGTTGAATGATCCAATTATGGAGGGAGTATTGGTGGAGACAGAGAACATGTTGGCTCGTGGAAGGATGGACCTACCACTCAGTCTGTGTTTCGCTGCGATGAGAGGAGATGATTTATTGTTACATCAATTGTTGAAACGAGGTTTGGATCCAAATGAATCTGACAACCATGGAAAGACTGCTTTGCATATAGCAGCTTCTAAAGGAAGTGAGAGCTGTGTCTTGCTTCTCTTGGATTACGGGGCTGATCCCGATGTTAGAGATTCTGAAGGCAACGTACCACTATGGGAAGCAATTCTGGGTGGACACGAATCAGTGATCAAGCTCTTAATGGAAAACGGCGCTTCCTTGAAAATGGGAGACGTGGGTCAATTCGCGTGCACCGCAGCAGAGCAGAACAATCTGGACTTGCTCATGGACATAGTTCGTTATGGAGGTAACATTACACTTCCTAGGACCAGCAATGGAACCACAGCCCTCCACGTGGCAGTCTGCGAAGGGAACGTTCAGATAGTCAAGTTCCTTCTGGACCAAGGGTCTAATATAGACAAACCAGACAAGCATGGTTGGACTCCAAGAGACCTAGCAGACCAACAGGGTCATGAAGATATCAAAGCCATTTTTGAGTCTTCAGAGGAGCCCAAGGCTCAATCTGTTATAGCTATTCCTGAGAGGCAGAGTACGAGGACCAGGTTCCTAGGGAGGTTCACTAGTGAGCCAACCATACCTTTGCCTCAACAAGACAGGTCGTTTCTAGGTACCGACGGGGGGTCGAGTCAGAGAAGACCGAGGAGGAGGACAAATAATTTTCATAATTCTCTGTTTGGGATTATGTCTGCAGCTCACAAGGGTGAGAACATGGAGGAGTTGCTGTTTTGTGGTAGTAATAACGCGAAGCGCACGAGGAATGGTGTAAAGTGTGGAGTTGGAGGAGGGTGTTTTGATGCCAGAGTCACTATTAGTTGTCCTGAGAAAGGAGAGGTTGGTGGGAAGCTTGTGTTGTTACCTGGGAGCTTCAAGGAGCTGCTTGAGATGGGTGCTAACAAATTTGGGGTGGTTAAGGATAATGTTAAGGTTTTGAACAAAGATGGGGCTGAGATTGATGGTGTTGAGGTTGTTAGAGATGGTGATCATCTTGTTTTTGTCAGTGCTGGTGGTGCCACGCATGAATTGTGA 2676 0.4488 MVGSRDRGVFRMTMCGQENIDLSRDGSQYSLSTGILPSLGARSNRRVKLRPFIISPYDRRYRIWETFLIILVIYTAWVSPFEFGFLKKPEGPLSITDNVVNGFFAIDIVLTFFVAYLDKTSYLLVDSRKQIAWKYARSWLVLDVISTIPSELARKISPSSLRSYGLFNMLRLWRLRRVSALFSRLEKDKNYNYFWVRCAKLICVTLFAVHCAGCFYYLIAARYHDPKKTWIGATMGNFLEESLWTRYVTSMYWSITTLTTVGYGDLHPVNSREMIFDIFYMLFNLGLTAYLIGNMTNLVVHGTSRTRKFRDTIQAASSFAQRNQLPGRLQDQMLAHLCLKFRTDSEGLQQQETLDSLPKAIKSSISHYLFYSLVDKVYLFRGVSNDLLFQLVSEMKAEYFPPKEDVILQNEAPTDFYILVTGAVELLVLKNGVEQVVGEAATGDLCGEIGVLCYRPQLFTVRTKRLSQLLRLNRTTFLNIVQANVGDGTIIMNNLLQHLNELNDPIMEGVLVETENMLARGRMDLPLSLCFAAMRGDDLLLHQLLKRGLDPNESDNHGKTALHIAASKGSESCVLLLLDYGADPDVRDSEGNVPLWEAILGGHESVIKLLMENGASLKMGDVGQFACTAAEQNNLDLLMDIVRYGGNITLPRTSNGTTALHVAVCEGNVQIVKFLLDQGSNIDKPDKHGWTPRDLADQQGHEDIKAIFESSEEPKAQSVIAIPERQSTRTRFLGRFTSEPTIPLPQQDRSFLGTDGGSSQRRPRRRTNNFHNSLFGIMSAAHKGENMEELLFCGSNNAKRTRNGVKCGVGGGCFDARVTISCPEKGEVGGKLVLLPGSFKELLEMGANKFGVVKDNVKVLNKDGAEIDGVEVVRDGDHLVFVSAGGATHEL 891
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g1135 891 MobiDBLite consensus disorder prediction 738 767 - -
Dere03g1135 891 SUPERFAMILY cAMP-binding domain-like 304 499 IPR018490 -
Dere03g1135 891 ProSiteProfiles Ankyrin repeat profile. 655 687 IPR002110 GO:0005515
Dere03g1135 891 MobiDBLite consensus disorder prediction 738 757 - -
Dere03g1135 891 Gene3D Jelly Rolls 343 503 IPR014710 -
Dere03g1135 891 ProSiteProfiles cAMP/cGMP binding motif profile. 379 481 IPR000595 -
Dere03g1135 891 ProSiteProfiles KHA domain profile. 817 891 IPR021789 -
Dere03g1135 891 Pfam KHA, dimerisation domain of potassium ion channel 817 881 IPR021789 -
Dere03g1135 891 SMART ANK_2a 655 684 IPR002110 GO:0005515
Dere03g1135 891 SMART ANK_2a 524 553 IPR002110 GO:0005515
Dere03g1135 891 SMART ANK_2a 590 619 IPR002110 GO:0005515
Dere03g1135 891 SMART ANK_2a 557 586 IPR002110 GO:0005515
Dere03g1135 891 ProSiteProfiles Ankyrin repeat region circular profile. 655 687 - -
Dere03g1135 891 ProSiteProfiles Ankyrin repeat region circular profile. 557 588 - -
Dere03g1135 891 SUPERFAMILY Voltage-gated potassium channels 56 300 - -
Dere03g1135 891 Pfam Cyclic nucleotide-binding domain 399 483 IPR000595 -
Dere03g1135 891 FunFam Potassium channel SKOR 62 300 - -
Dere03g1135 891 CDD CAP_ED 379 484 IPR000595 -
Dere03g1135 891 ProSiteProfiles Ankyrin repeat profile. 590 622 IPR002110 GO:0005515
Dere03g1135 891 Gene3D - 525 709 IPR036770 -
Dere03g1135 891 PRINTS Ankyrin repeat signature 671 685 IPR002110 GO:0005515
Dere03g1135 891 PRINTS Ankyrin repeat signature 558 573 IPR002110 GO:0005515
Dere03g1135 891 ProSiteProfiles Ankyrin repeat profile. 557 589 IPR002110 GO:0005515
Dere03g1135 891 ProSiteProfiles Ankyrin repeat region circular profile. 590 621 - -
Dere03g1135 891 PANTHER POTASSIUM CHANNEL AKT1 27 883 IPR045319 GO:0005249|GO:0006813
Dere03g1135 891 Pfam Ankyrin repeats (3 copies) 529 619 IPR002110 GO:0005515
Dere03g1135 891 Pfam Ankyrin repeats (3 copies) 629 712 IPR002110 GO:0005515
Dere03g1135 891 SMART cnmp_10 379 496 IPR000595 -
Dere03g1135 891 PRINTS EAG/ELK/ERG potassium channel family signature 247 264 IPR003938 GO:0005249|GO:0006813|GO:0016020
Dere03g1135 891 PRINTS EAG/ELK/ERG potassium channel family signature 108 117 IPR003938 GO:0005249|GO:0006813|GO:0016020
Dere03g1135 891 PRINTS EAG/ELK/ERG potassium channel family signature 97 107 IPR003938 GO:0005249|GO:0006813|GO:0016020
Dere03g1135 891 PRINTS EAG/ELK/ERG potassium channel family signature 291 300 IPR003938 GO:0005249|GO:0006813|GO:0016020
Dere03g1135 891 PRINTS EAG/ELK/ERG potassium channel family signature 74 81 IPR003938 GO:0005249|GO:0006813|GO:0016020
Dere03g1135 891 PRINTS EAG/ELK/ERG potassium channel family signature 273 284 IPR003938 GO:0005249|GO:0006813|GO:0016020
Dere03g1135 891 SUPERFAMILY Ankyrin repeat 528 710 IPR036770 -
Dere03g1135 891 Gene3D - 63 300 - -
Dere03g1135 891 FunFam Potassium channel KAT2 367 503 - -
Dere03g1135 891 Pfam Ion transport protein 62 306 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere03g1135 Dere-ChrDere03 18269589 18275928 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere03g1135 22 881 Ion Channels AT2G25600 64.319 0.0 1127
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere03g1135 03 18269589 18275928 Dere03g1135 03 18269589 18275928 ECH