Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g1127 ATGGGGTCCTATGATCCCTCATGTGGCGGCACCTCCTCCTCCAATGGTAGCTCCTCGAGCAACGGAACCAAGACGGCGGAGATGGACGGTCTCCTCGCCGGCGCAGGATACAAGGTCAGGTCGTCGGAGCTCCATCAAGTGGCTCGACGTCTCGAGCACCTCGAGAACGTCATGGTCAACTCTGCCGCTGACATTTCTCAACTCGCTTCCGATACCGTACACTACGACCCCTCCGATATCGGCTCCTGGGTCGACACTCTTCTCACCGAATTAAACCAGACCATCTCTCTGCCGTCAGATCTCTCGGGGCTACCGGATCTCCCAACTGGTCCGCTGCTCGATCAAATGCCGGTTGATAATCGATGGGTCGTGGACTATGAAATGTCTCAGAATCAGAACCACCATAGCATAGTTCCTCAGCACCAGCAGCTTCAGCAATTGACGGTGGTAACATCAATGGAAGAGAACTCTGGGATAAGGCTGGTCCATATGCTGATGACCTGTGCGGATTCTCTTCAACGTGGCGAGCTAGCACTCGCAGGCTCGCTGATCGAGGACATGCAGGGCTTGCTGGCCCACGTGAACACCGGCTGCGGCATCGGGAAAGTTGCCGGATACTTCATCGACGCCCTGAGCCGTCGGATCTTCGCACCGCAGACAATCCGCTCTGGCTCCTGCACCAGCTCGCCTTACGAGGACGAGGTACTGTACCATCACTATTACGAGGCCTGTCCGTACCTGAAGTTCGCCCACTTCACGGCGAACCAAGCCATCCTGGAGGCCTTTAACGGCCACGACTCCGTCCATGTCATAGACTTCAACCTCATGCACGGCCTCCAATGGCCTGCTCTGATTCAGGCTCTGGCCCTCCGTCCCGGTGGACCTCCCTTGCTGCGGTTGACGGGCATTGGCCCGCCGTCACCGGATGGCCGCGACAATCTCCGCGAAATCGGATTGCGACTAGCTGAGTTAGCTCGTTCCGTGAGCGTCCGATTCGCCTTCCGGGGAGTGGCCGCTTTGAGACTCGAAGACGTGAAGCCATGGATGCTTCAGGTGAGCCCGAAAGAAGCCGTGGCTGTGAACTCCATCATGCAGCTTCACCGCCTCATCGGATCAGACCCGACAAGAGAACCCGCCATCGAATCGGTCCTAAGTTGGATCCGGAGTCTGAACCCGAAAATCATGACTGTAGTGGAGCAAGAAGCAAATCACAACCAAACCGGATTCTTAGACCGGTTTACGGAAGCCCTCTATTATTACTCGACCATGTTCGACTCGCTGGAGGCTTGCTCGCTCCAGCCGGATAAAGCCTTAGCCGAGACATACATACAGAAGGAGATATGCAACGTGGTTTGCTGTGAGGGATCGGCTCGGGTGGAGAGGCACGAGCCGCTGGCGAAGTGGAGGGATCGGCTTGGGAAAGCCAGGTTTAGGGCTCTGCATTTGGGCTCAAATGCTTTCAAGCAAGCCAGCATGTTGTTGACTCTGTTCTCGTCTGAGGGTTACCGTGTGGAAGAGAACGAAGGGTGTTTGACTTTGGGTTGGCATAGCCGGCCTCTGATCGCGGCTTCGGCATGGCAAGCCGTTCCAGAGTTTGAAGTTGCTTGA 1608 0.5641 MGSYDPSCGGTSSSNGSSSSNGTKTAEMDGLLAGAGYKVRSSELHQVARRLEHLENVMVNSAADISQLASDTVHYDPSDIGSWVDTLLTELNQTISLPSDLSGLPDLPTGPLLDQMPVDNRWVVDYEMSQNQNHHSIVPQHQQLQQLTVVTSMEENSGIRLVHMLMTCADSLQRGELALAGSLIEDMQGLLAHVNTGCGIGKVAGYFIDALSRRIFAPQTIRSGSCTSSPYEDEVLYHHYYEACPYLKFAHFTANQAILEAFNGHDSVHVIDFNLMHGLQWPALIQALALRPGGPPLLRLTGIGPPSPDGRDNLREIGLRLAELARSVSVRFAFRGVAALRLEDVKPWMLQVSPKEAVAVNSIMQLHRLIGSDPTREPAIESVLSWIRSLNPKIMTVVEQEANHNQTGFLDRFTEALYYYSTMFDSLEACSLQPDKALAETYIQKEICNVVCCEGSARVERHEPLAKWRDRLGKARFRALHLGSNAFKQASMLLTLFSSEGYRVEENEGCLTLGWHSRPLIAASAWQAVPEFEVA 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g1127 535 MobiDBLite consensus disorder prediction 1 26 - -
Dere03g1127 535 SMART DELLA_2 29 101 - -
Dere03g1127 535 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 143 523 IPR005202 -
Dere03g1127 535 ProSiteProfiles GRAS family profile. 152 527 IPR005202 -
Dere03g1127 535 Pfam Transcriptional regulator DELLA protein N terminal 29 94 IPR021914 -
Dere03g1127 535 Gene3D - 27 91 IPR038088 -
Dere03g1127 535 FunFam DELLA protein GAI 27 91 - -
Dere03g1127 535 Pfam GRAS domain family 161 527 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere03g1127 Dere-ChrDere03 18142022 18143629 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere03g1127 28 527 GRAS Transcription Factor Family AT1G14920 49.614 2.27e-168 486
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Dere03g1127 GRAS 3.4e-126 CL0063