LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Dere03g1126	ATGGGGAAGGAACAAATCCAAGTGTTAAGTGCACTAGATACGGCAAAAACACAATGGTACCATTTCACTGCAATCATTATTGCAGGAATGGGGTTCTTCACGGATGCATATGATTTATTTGTGATTTCACTGGTCACAAAATTGCTTGGGCGGGTATACTACCACGTGGATGGTGCCGCGAAACCTGGTACATTGCCTCCCAATGTGTCTGCTGCAGTTAATGGCGTGGCCTTCTGTGGCACACTCTCTGGTCAACTCTTCTTCGGCTGGCTAGGAGACAAGATGGGTCGCAAAACAGTGTATGGTGTGACTCTGCTGATGATGATCCTATGCTCCCTTGGCTCTGGCCTCTCCTTCGGACACACCCCTAAGACTGTCATGACCACTCTCTGCTTCTTCCGCTTCTGGCTTGGCTTTGGTATTGGTGGAGACTACCCTCTTTCTGCTACTATCATGTCTGAGTATTCTAACAAGAAGACTCGGGGTGCTTTCATTGCTGCAGTTTTTGCCATGCAGGGTTTTGGGATTTTGGCTGGTGGGTTGTTTACAATGATCATGTCTGCTGTGTTCAAGTCGAAGTTTGGTGCTCCTGCTTACGAGGTTGATCCAGTTGGGTCAACTGTTCCACAAGCAGACTTTGTTTGGAGGATAATTCTAATGGCGGGATCAGTCCCAGCAGCAATGACCTTTTATTCGAGGGTGAAGATGCCTGAAACTGCTCGTTACACTGCACTTGTTGCCAAGAACGCAGAGAGAGCAGCAGCAGATATGGCCAAGGTTTTGCAAGTGGATATTCAAGCTGAACCCCAGAAAGTTGAACAGTCTCATAAGTCAAAGGCTAACTCATTTGGCTTGTTCTCAAAGGAGTTTCTGACTCGCCATGGCCTTCATTTGCTTGGAACCTCAAGCACGTGGTTCTTGCTTGACATTGCTTATTACAGCCAAAACCTCTTCCAGAAGGATATATTCAGTGCAATTGGATGGATTCCTCCTGCGCAAACCATGAATGCTCTTGAGGAGCTTTATTACATTGCCAAGGCTCAAACGCTTATTGCTCTGTGCAGCACAATCCCAGGCTACTGGTTCACAGTGGCTTTGATTGACAAATTGGGGAGATTCACTATCCAATTGATGGGGTTCTTCTTCATGACTGTGTTTATGTTTGCTCTAGCCATTCCTTACGACCACTGGACTCTCAAGGAGAACCGAATTGGGTTTGTGGTGATGTATTCCTTTACGTTCTTCTTTGCAAATTTTGGGCCTAATGCTACCACATTTGTTGTGCCAGCAGAAATTTTCCCAGCTAGATTCAGATCAACCTGTCATGGCATATCATCAGCGTCTGGGAAGCTAGGGGCTATTGTTGGTGCGTTTGGGTTCTTGTATTTGGCACAGAGTCCAGACCCCAACAAGGTAGCTGCAGGGTACACTCCAGGTATTGGGGTGAAGAATTCACTGCTTGTATTAGCTGTGGTTAATTGTTTGGGCTTCTTTCTCACATTCCTTGTGCCTGAGCCAAAGGGAAAATCTTTGGAGGAAATGTCTGGTGAAAATGAGGCAGAAGATGAAGGCAAGGTAGAACCATGCTAA	1590	0.4635	MGKEQIQVLSALDTAKTQWYHFTAIIIAGMGFFTDAYDLFVISLVTKLLGRVYYHVDGAAKPGTLPPNVSAAVNGVAFCGTLSGQLFFGWLGDKMGRKTVYGVTLLMMILCSLGSGLSFGHTPKTVMTTLCFFRFWLGFGIGGDYPLSATIMSEYSNKKTRGAFIAAVFAMQGFGILAGGLFTMIMSAVFKSKFGAPAYEVDPVGSTVPQADFVWRIILMAGSVPAAMTFYSRVKMPETARYTALVAKNAERAAADMAKVLQVDIQAEPQKVEQSHKSKANSFGLFSKEFLTRHGLHLLGTSSTWFLLDIAYYSQNLFQKDIFSAIGWIPPAQTMNALEELYYIAKAQTLIALCSTIPGYWFTVALIDKLGRFTIQLMGFFFMTVFMFALAIPYDHWTLKENRIGFVVMYSFTFFFANFGPNATTFVVPAEIFPARFRSTCHGISSASGKLGAIVGAFGFLYLAQSPDPNKVAAGYTPGIGVKNSLLVLAVVNCLGFFLTFLVPEPKGKSLEEMSGENEAEDEGKVEPC	529

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Dere03g1126	529	MobiDBLite	consensus disorder prediction	510	529	-	-
	Dere03g1126	529	FunFam	Inorganic phosphate transporter 1-6	20	528	-	-
	Dere03g1126	529	Pfam	Sugar (and other) transporter	26	515	IPR005828	GO:0016020\|GO:0022857\|GO:0055085
	Dere03g1126	529	PANTHER	SOLUTE CARRIER FAMILY 22 MEMBER	20	506	-	-
	Dere03g1126	529	NCBIfam	phosphate:H+ symporter	11	517	IPR004738	GO:0005315\|GO:0006817\|GO:0016020
	Dere03g1126	529	Gene3D	MFS general substrate transporter like domains	20	528	IPR036259	-
	Dere03g1126	529	CDD	MFS_PhT	25	507	-	-
	Dere03g1126	529	ProSiteProfiles	Major facilitator superfamily (MFS) profile.	24	508	IPR020846	GO:0022857
	Dere03g1126	529	SUPERFAMILY	MFS general substrate transporter	12	515	IPR036259	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Dere03g1126	Dere-ChrDere03	18131998	18133587	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Dere03g1126	1	523	Inorganic Solute Cotransporters	AT3G54700	81.262	0.0	895