Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g1123 ATGGTCTACTCGACCTTGTGGCTTAAGCCAATTATGAAGCTCACCAAGGGATATGAACCAACTATGGATGGATCTAAAGGGTTCCATTTTGCTGCGATAATTGTAATTAAAATTAAAGAAAACACTTCTACCACCAACGCTACCCGCGCACCCACTGCTTCTGTTTTCTTTATCCCTCCCTTTTCTCCTATCACTTTTCCTGGTCCCGTGATACTGTCTTACTCATACATACCCACTAACACATTTCCCACCATTCCTCTCTCTCATGGCATTTTCCCTGAAAATCGCTGCTGGGTTTCTTCAAAACCATTGTCACAAGCCCCTTCTGCAAATCAGCCTATAGAAATCGTACATCGTTTCGTGTTCCTTTTCGATTTTCGTTTTTGTTATTGTACTGAATTGCCAATGGGGGTGGTGTTCGATGCTTGGCCTGTGATGCTTGTTGCTACCTTTGTTTTTTTCCTTCTGCAACTGAGTGGGCGAGTGAACTCGGAGCCCATTCAGGACAAGCAAGCTCTCCTTGCTTTCATCTCTCAAACTCCTCACGCGAATCGCGTCCGATGGAACGCTTCTGATTCTGTCTGCAACTGGTTTGGCGTCCAATGCGATGCTTCACGTTCTTTTGTTTACTCTCTCCGTCTTCCCGGCGCCGGCCTTGTGGGTCCCATTCCGCAGGCCACTATAGGTCGTCTCACTCGTCTACGTGTACTCAGTCTCCGCTCGAACGGCCTTGCCGGTGAGATCCCCTCCGATTTCTCCAATATGACTTCACTTCGCAGCCTCTACCTGCAGCATAATGGGCTCTCCGGCGAGTTTCCCGCCACGGTGACTCGGTTGACTCGTTTGACTCGTCTGGATCTTTCGTCCAACAACTTCACGGGTACAATCCCTTTCTCAATCAACAATTTGACCCACCTGAGTGGCCTTTTCTTGGAAAACAATAGATTCTCTGGCAATTTGCCAAGCATTACAGCCAAACTGGTGAACTTCAACGTGTCCCATAACCAGCTCAATGGTTCGATCCCCGAAACCCTCTCGAAATTCCCCGCCTCCTCATTTGCTGGAAACCTTGCTCTGTGTGGAGGACCATTACCACCGTGTAGCCCATTCTTTCCTGCACCGGCGCCGTCGCCTTCCTCTGTCGCACCCTCAATTCCAGTTCGCGTGAAAAAGTCCAAAAAGCTCTCAAAAGCTGCCATTATCGCAATTGCGGTTGGGTCCGCTCTAGTTTTCTTGTTACTTCTGTTCCTTCTCTTGCTCTACCTCCGCAGGCGCCAACGCCGGCAATCTGCGAAGATGCCTAAGCCAGTGACGACGGCGGCGCGTGCTGTGCCGGCGGAGGCTGGGACATCATCTTCGAAGGACGATATTACAGGCGGGTCTGCAGAGACTGAGCGGAATAAATTGGTGTTTTTCGAAGGCGGGATTTATAGCTTTGATTTGGAGGATTTGTTGAGAGCTTCTGCGGAAGTTCTGGGGAAAGGAAGCGTCGGAACTTCCTATAAAGCGGTGTTGGAGGAGGGGACGACGGTGGTGGTGAAGAGGCTTAAGGACGTGGCTGTGACGAAGAAGGAGTTCGAGACGCAAATGGAGGTTCTGGGGAAGATTAAGCATGAGAATGTGGTTCCTCTTAGAGCTTTTTACTACTCTAAGGATGAGAAATTGCTGGTTTACGATTACATGCCGGCTGGTAGCTTGTCTGCTCTACTTCACGGCAGTAGAGGGTCAGGGAGAACGCCACTGGACTGGGATAACCGGATGAGAATAGCGCTAGGAGCCGCAAGAGGGCTCGCCCACCTACACGTGTCAGGAAAAGTGGTCCACGGCAACATAAAATCTTCCAACATCCTCCTCCGAGCTGACCACGAGGCTTCCGTTTCGGACTTCGGGCTGAACCCTCTGTACGGAAACACCGTCCCCTCGAATCGGGTCGCGGGTTATCGGGCACCCGAGGTTGTCGAAACCCGAAAAGTGTCGTTCAAATCCGACGTGTACAGCTTCGGCGTGTTGTTGCTGGAGCTGTTGACAGGAAAGGCTCCGAACCAAGCGTCGCTGGGCGAGGAAGGCATCGACCTCCCGAGGTGGGTTCAGTCCGTGGTTCGAGAAGAATGGACCGCCGAAGTGTTCGACGCCGAGCTGACGAGGCACCTCAACATCGAGGAAGAGATGGTTCAGCTGTTGCAAATAGGGATGGCTTGTGTTTCCGTCGTGCCCGACCAGAGACCCACCATGCAAGAGGTGGTTCGTATGATTGAGGATATGAACAGGGGCGACACCGATGATGCCTTACGGCAGTCGTCCGATGATCCTTCCAAAGGATCAGACGGTCAGACGCCGCCTCCCGAGTCAAGGACTCCAGCTAGTTCTCGCGCACCTTAA 2379 0.5179 MVYSTLWLKPIMKLTKGYEPTMDGSKGFHFAAIIVIKIKENTSTTNATRAPTASVFFIPPFSPITFPGPVILSYSYIPTNTFPTIPLSHGIFPENRCWVSSKPLSQAPSANQPIEIVHRFVFLFDFRFCYCTELPMGVVFDAWPVMLVATFVFFLLQLSGRVNSEPIQDKQALLAFISQTPHANRVRWNASDSVCNWFGVQCDASRSFVYSLRLPGAGLVGPIPQATIGRLTRLRVLSLRSNGLAGEIPSDFSNMTSLRSLYLQHNGLSGEFPATVTRLTRLTRLDLSSNNFTGTIPFSINNLTHLSGLFLENNRFSGNLPSITAKLVNFNVSHNQLNGSIPETLSKFPASSFAGNLALCGGPLPPCSPFFPAPAPSPSSVAPSIPVRVKKSKKLSKAAIIAIAVGSALVFLLLLFLLLLYLRRRQRRQSAKMPKPVTTAARAVPAEAGTSSSKDDITGGSAETERNKLVFFEGGIYSFDLEDLLRASAEVLGKGSVGTSYKAVLEEGTTVVVKRLKDVAVTKKEFETQMEVLGKIKHENVVPLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALGAARGLAHLHVSGKVVHGNIKSSNILLRADHEASVSDFGLNPLYGNTVPSNRVAGYRAPEVVETRKVSFKSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDAELTRHLNIEEEMVQLLQIGMACVSVVPDQRPTMQEVVRMIEDMNRGDTDDALRQSSDDPSKGSDGQTPPPESRTPASSRAP 792
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g1123 792 SUPERFAMILY Protein kinase-like (PK-like) 490 751 IPR011009 -
Dere03g1123 792 CDD STKc_IRAK 492 754 - -
Dere03g1123 792 PANTHER OS05G0588300 PROTEIN 147 767 - -
Dere03g1123 792 Pfam Leucine rich repeat 223 268 IPR001611 GO:0005515
Dere03g1123 792 SUPERFAMILY L domain-like 172 348 - -
Dere03g1123 792 Pfam Protein kinase domain 489 749 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere03g1123 792 Pfam Leucine rich repeat N-terminal domain 168 203 IPR013210 -
Dere03g1123 792 MobiDBLite consensus disorder prediction 753 768 - -
Dere03g1123 792 Gene3D Ribonuclease Inhibitor 327 368 IPR032675 -
Dere03g1123 792 Gene3D Transferase(Phosphotransferase) domain 1 561 773 - -
Dere03g1123 792 MobiDBLite consensus disorder prediction 753 792 - -
Dere03g1123 792 FunFam pollen receptor-like kinase 1 456 560 - -
Dere03g1123 792 MobiDBLite consensus disorder prediction 769 792 - -
Dere03g1123 792 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 561 765 - -
Dere03g1123 792 Gene3D Phosphorylase Kinase; domain 1 453 560 - -
Dere03g1123 792 ProSiteProfiles Protein kinase domain profile. 486 763 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere03g1123 792 Gene3D Ribonuclease Inhibitor 167 324 IPR032675 -
Dere03g1123 792 FunFam Probable inactive receptor kinase RLK902 166 324 - -
Dere03g1123 792 MobiDBLite consensus disorder prediction 431 460 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere03g1123 Dere-ChrDere03 17989389 17996187 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere03g1123 148 775 Receptor kinase-like Gene Family AT5G58300 52.747 0.0 635
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Dere03g1123 Pkinase 2.1e-39 CL0016