Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g1097 ATGTATCACGGCATTAATATTGACCCAATCTTGTATTCTGACCAACAGCAGCAACCATTTTTCTGCTCACCACTTTTTCCCAATGATAGCAACCCAACTTCCAAACCACCAAACTCTCTTGCCCCAACAACACCATCTTTTCCTCCTCCTCCTCCTTTGACCTTTTCTCCCTTCTTCCCTTCTCCCTTTGAGGACAATAATGGAATTTTCCACCAATCTCTAGCTGAAGCTGTTATTGTTGACATGGAGGTAACTCCTCGTAAGGGGAGTACAACAACAAAGCAGATCTCAATAAGAAAAAGAAGTTCCAATGGTAAGGGAGATCGGCACAGCAAGATTAACACAGCAAGGGGACCAAGGGATCGGAGAATGAGGCTATCCCTTGAGGTTGCCAAGAGGTTTTTTGGGCTGCAAGACATGCTGGGCTTCGACAAGGCCAGCAAAACCGTGGAGTGGCTGCTCAACCAAGCAAAAGAGGGGATCAAGCAGCTAGCAAGAGGCAAGAATCATAGCGCATCTAATTCAACTTCTGAATGTGAAGAGGTATCTGGCTTAGATGAGGTTGTAGTTAGTGCTAAAAATGGAGATCAAAAGGGGGATTCCGCTATTAGGAGAAAAATCAAACTCTCTCATCGAAAGGGTTCGTTTCATGTTCTTGCTAGGGAGTTGAGGGTGAAGGCAAGAGAAAGGGCAAGAGAAAGGACAAAGCAAAAGATGAGGAGTAGGCTACTAGCTGCAGATGATGTTGAATCAAAGCAATCTTGTTCTTGGAATCTCTTAGAAAAGGGAGAAGAATCTAACAATCAGAGCCAAAATGTGACGACTGAGGCTGAGAAACCAAGTTCTCAAGCAATTAAACAGAATTTGTGGACTATGGATGATGAAGATATGGCAGGTGATGATTCTTTAATGACCATCAAATGGAGCCCATCCATGATCTTCAATTCAATGCATAACTCCGGACTCCTTCATGAAGCGGTTGTGTCTGCTGATGAATACAGATTTCTATTTTGTGGAATCATCCCTTGGAAAAGGAATAGGATTACTTCTCCAATGTATTTGTTGGGTGACTGGGGGTGGCTAGAAGCAGAAGCAATTATTAATGGTGGATATCAGAATAGTCAGATCAATGTTAGAAATGTACGTCCTCAGGGTTCTGACAGAGAGCTAAGAGGGAACAATTTCAACCCTAATCTATCTATTTCAATACAACACGTACGGAACTTTCTTTCTTGTAGTCTCTCCCCTTCACACGTCCATGGATCCTGGGAAATAAAATGGAATGGTGGTACCAGAACCAGCGAAAATAGTTTTATAATGACAAGTACTAAGCCCGAAAAACCAGGATTAGAACTGGAGTACCATAAAGATGATGCCAAGATCTGTTCAGATGATATTGTGTAA 1404 0.4252 MYHGINIDPILYSDQQQQPFFCSPLFPNDSNPTSKPPNSLAPTTPSFPPPPPLTFSPFFPSPFEDNNGIFHQSLAEAVIVDMEVTPRKGSTTTKQISIRKRSSNGKGDRHSKINTARGPRDRRMRLSLEVAKRFFGLQDMLGFDKASKTVEWLLNQAKEGIKQLARGKNHSASNSTSECEEVSGLDEVVVSAKNGDQKGDSAIRRKIKLSHRKGSFHVLARELRVKARERARERTKQKMRSRLLAADDVESKQSCSWNLLEKGEESNNQSQNVTTEAEKPSSQAIKQNLWTMDDEDMAGDDSLMTIKWSPSMIFNSMHNSGLLHEAVVSADEYRFLFCGIIPWKRNRITSPMYLLGDWGWLEAEAIINGGYQNSQINVRNVRPQGSDRELRGNNFNPNLSISIQHVRNFLSCSLSPSHVHGSWEIKWNGGTRTSENSFIMTSTKPEKPGLELEYHKDDAKICSDDIV 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g1097 467 MobiDBLite consensus disorder prediction 23 58 - -
Dere03g1097 467 Pfam TCP family transcription factor 106 241 IPR017887 -
Dere03g1097 467 ProSiteProfiles R domain profile. 221 238 IPR017888 -
Dere03g1097 467 MobiDBLite consensus disorder prediction 23 37 - -
Dere03g1097 467 ProSiteProfiles TCP domain profile. 106 164 IPR017887 -
Dere03g1097 467 MobiDBLite consensus disorder prediction 261 283 - -
Dere03g1097 467 MobiDBLite consensus disorder prediction 89 119 - -
Dere03g1097 467 MobiDBLite consensus disorder prediction 101 119 - -
Dere03g1097 467 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 94 291 IPR005333 GO:0003700
Dere03g1097 467 MobiDBLite consensus disorder prediction 38 58 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere03g1097 Dere-ChrDere03 17564294 17570344 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere03g1097 63 314 TCP Transcription Factor Family AT3G18550 31.834 1.92e-26 109
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Dere03g1097 TCP 2.1e-40 No_clan