Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g1075 ATGGCTGGTCGTAGAAGAAGGAGACACCACTTTAGCAGAATCCATGCGTTTACGTGTGGGAAATCATCGTTCAGAGGGGAGCATTCGCTAATTGGAGGTCCTGGATTCTCGAGGATAGTGTATTGCAACGAACCAGAACGAGTGGAGGATTTTGGCGACAATTACGTGAGAACTACTAAATATACACTACCCTCGTTCCTTCCTAAGTCACTGTTCGAGCAATTTAGGAGGGTTGCGAATTTCTATTTCCTCGTATGTGCAATCTTGTCTTTCTTCCCTGTTTCTCCTTACTCTGCTGTCAGCAATGTTGTTCCCTTGGTGGTTGTGGTTGCTGCAACCATGGGCAAAGAGATGCTTGAGGACTGGAGAAGGAAACAGCAGGACATTGAGATGAATAACAGAAAGGTTAAAGTACATCGTAGAGAAGGTGTTTTTGAATATTCTAAATGGAGGGATCTGAGAGTTGGAAACATAGTAAAGGTGGAAAAGGATGAATTTTTTCCTGCTGATCTCATCTTACTTTCATCAAGCTATGATGATGCAATTTGCTATGTTGAGACCATGAATCTTGACGGAGAGACAAATCTTAAATTGAAACAAGCACCGGAAGAAACTTCCAAGTTGCAAGAAGATTCAAGCTTTCAAAATTTCAAGGCTATGATCAAATGTGAAGATCCAAATGCAAATTTGTACTCCTTCGTAGGCACTCTGGAGCTTGAAGATCAACAGTATGCTCTTGCACCTCAGCAGCTTCTGCTAAGGGACTCAAAGCTGAGGAATACCGATTTCATCTATGGTGTGGTAATCTTTACAGGTCATGATACAAAGGTCATGCAGAATTCAACAGAGCCTCCTTCCAAGAGAAGCAAAATTGAGAAGCGGATGGATAAAATCATCTACTTCCTGTTCTTTGTCTTAGTGATGATTTCTCTTATTGGGTCCATTTTCTTTGGGATTTCAACCAGGCAAGACCTTGAAAATGGGAGAACAAAAAGATGGTACCTTAGACCGGATAATACCACAGTCTATTATGATCCAAATCGAGCATCAGTTGCAGCAATTTTGCATTTCTTGACTGCGCTTATGTTGTATAGTTACTTGATTCCTATTTCCTTGTATGTGTCCATAGAAATTGTGAAAGTTCTTCAGAGCATATTCATCAACCAAGACGTGCACATGTATTATGAAGAGACTGACAGGCCAGCTCATGCCCGTACCTCAAATTTGAATGAAGAACTTGGCCAAGTTGATACCATACTTTCAGATAAAACTGGAACTTTAACTTGTAATTCCATGGAATTTATCAAGTGTTCCATTGCTGGGGTTGCTTATGGTCAAGGAGTTACCGAAGTTGAGAGAGCTCTCGCTAGAAGAAAAGGATCACCATTAGATCAAAATTTGGCAGACAAGGATGATCATGTTGCAGGAAGGCCATCCATTAAAGGATTTAACTTTGTGGATGGAAGGATTATGAATGGAAATTGGTTCAAGGAGCCTCATGCCAATGAAATCCAGAACTTCCTACGGTTACTGGCTGTATGCCATACTGCAATACCTGAAGTTGATGAAGAAACTGGTAAAATTTCATATGAAGCTGAATCACCAGATGAGGCAGCTTTTGTGATTGCTGCAAGAGAGCTAGGGTTTGAATTTTATGAAAGGACACAGACAGCCATTTTGATACGCGAGTTTAACCCCAAATCCAATTTGAAGGAGGAAAGATCTTACAAACTTTTAAACATAATAGAATTTAGCAGTGCTAGAAAGCGGATGTCTGTAATTGTTAGAGATGATGAGGGGAAACTATTACTACTTTCCAAAGGTGCTGATAGTGTCATCTTTGAAAGACTTGCAAAGGATGGAAGGGTGTTTGAGGAGGAGACTAAGAAGCACATTGATGAGTATGCTGATGCTGGTCTGAGGACATTGTTACTTGCATATCGCACACTTGATGAGGAAGAGTATAATCAATTTAACAAAGAATTCACAGAGGCCAAGAACTTAGTTAGTGCAGATCGGGAGCAGATGATAGAGGAAGTAGCAGAAAAGATTGAGAAGGATTTAATTCTTCTTGGTGCTACTGCTGTTGAAGACAAACTTCAAAATGGGGTTCCTGAATGTATTGACAAGCTAGCGCAGGCTGGAATAAAGCTGTGGGTTTTGACTGGTGATAAGATGGAGACAGCAATCAATATTGGATTTGCTTGCAGTCTACTAAGACAAGGAATGAAGCAGATTATAATTAGTTCAGACACTCCAGAAATCAAATCACTGGAGAAAGCAGAGGACAAGTCTGCTGCAGCAGCGGCAATTAAGGCAAGTGTTCTTCATCAGATAAAGGAGGGAAAGGCCTTGCTTTCTAAATTAAATGAAAATTCTGAGGCATTAGCTCTAATCATTGACGGGAAGTCTCTTGTCTATGCACTACACAATGATGTGAAAGACTCGTTTCTTGAACTTGCCATTGGCTGTGCATCTGTTATATGCTGTCGTTCATCTCCCAAACAGAAAGCACTTGTTACAAGACTGGTTAAGACTAAAACTGGTAGTACAACTCTAGCAATTGGTGATGGGGCAAATGATGTTGGAATGCTCCAAGAAGCAGACATTGGAATTGGTATCAGTGGTGTTGAAGGAATGCAGGCAGTTATGTCAAGTGACATTGCGATTGCCCAATTTCGGTTTCTAGAGCGCCTACTTCTTGTGCATGGACATTGGTGTTACAGAAGGATATCAAAAATGATCTGCTACTTCTTTTACAAGAATATAGCCTTCGGCTTCACTCTCTTCTTCTTTGAGATGTATGCATCATTCTCAGGGCAAGCAGCCTACAATGATTGGTTCTCATCGCTATACAATGTAATCTTCACTTCACTTCCTGTGATTGCCTTAGGAGTGTTCGACCAGGATGTCTCTGCTAAATTATGTTTTAAGTTTCCATTATTATATCAAGAAGGTGTCCAAAATGTTCTGTTCAGTTGGAAACGAATCCTTGGATGGGTATTCAATGGGTTGCTGAGTTCGACTATCATCTTCTTCTTTTGCACCAAAGCGATGGAACATCAAGCCTTCCGTAAGGGCGGTGAAATCGTTGGCCTAGAAGTCCTGGGAACTACCATGTACACTTGCGTTGTTTGGGTGGTCAACTGCCAAATGGCATTATCTATCAGTTACTTTACATACATACAGCATATATTCATATGGGGTAGCATTCTAATTTGGTACATTTTCCTCTTGGCATATGGAGCCATGGATCCCTCTATTTCAACCACTGCCTATAAGGTCTTCATTGAAGCTCTTGCTCCTTCCCCATCTTACTGGTTCATCACTTTGCTTGTGCTTCTTTCCTCCCTTCTTCCATATTTCACCTATTCTTCCATCCAGATGAGATTTTTCCCTCTGTTCCATCAAATGATACAGTGGATAAGAAACGATGGGCAAACCAGTGATCCAGAGTACTGTAATATAGTGAGACAGAGATCGATACGACACACGACAGTTGGTTACACGGCTCGTTTTGAAGCATCCAAACGATTTGAAGACAAGCCTTATCAACAGCAGCATCATTAA 3570 0.4095 MAGRRRRRHHFSRIHAFTCGKSSFRGEHSLIGGPGFSRIVYCNEPERVEDFGDNYVRTTKYTLPSFLPKSLFEQFRRVANFYFLVCAILSFFPVSPYSAVSNVVPLVVVVAATMGKEMLEDWRRKQQDIEMNNRKVKVHRREGVFEYSKWRDLRVGNIVKVEKDEFFPADLILLSSSYDDAICYVETMNLDGETNLKLKQAPEETSKLQEDSSFQNFKAMIKCEDPNANLYSFVGTLELEDQQYALAPQQLLLRDSKLRNTDFIYGVVIFTGHDTKVMQNSTEPPSKRSKIEKRMDKIIYFLFFVLVMISLIGSIFFGISTRQDLENGRTKRWYLRPDNTTVYYDPNRASVAAILHFLTALMLYSYLIPISLYVSIEIVKVLQSIFINQDVHMYYEETDRPAHARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGVAYGQGVTEVERALARRKGSPLDQNLADKDDHVAGRPSIKGFNFVDGRIMNGNWFKEPHANEIQNFLRLLAVCHTAIPEVDEETGKISYEAESPDEAAFVIAARELGFEFYERTQTAILIREFNPKSNLKEERSYKLLNIIEFSSARKRMSVIVRDDEGKLLLLSKGADSVIFERLAKDGRVFEEETKKHIDEYADAGLRTLLLAYRTLDEEEYNQFNKEFTEAKNLVSADREQMIEEVAEKIEKDLILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMKQIIISSDTPEIKSLEKAEDKSAAAAAIKASVLHQIKEGKALLSKLNENSEALALIIDGKSLVYALHNDVKDSFLELAIGCASVICCRSSPKQKALVTRLVKTKTGSTTLAIGDGANDVGMLQEADIGIGISGVEGMQAVMSSDIAIAQFRFLERLLLVHGHWCYRRISKMICYFFYKNIAFGFTLFFFEMYASFSGQAAYNDWFSSLYNVIFTSLPVIALGVFDQDVSAKLCFKFPLLYQEGVQNVLFSWKRILGWVFNGLLSSTIIFFFCTKAMEHQAFRKGGEIVGLEVLGTTMYTCVVWVVNCQMALSISYFTYIQHIFIWGSILIWYIFLLAYGAMDPSISTTAYKVFIEALAPSPSYWFITLLVLLSSLLPYFTYSSIQMRFFPLFHQMIQWIRNDGQTSDPEYCNIVRQRSIRHTTVGYTARFEASKRFEDKPYQQQHH 1189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g1075 1189 Gene3D - 687 895 IPR023214 -
Dere03g1075 1189 Gene3D - 530 668 IPR023299 GO:0000166
Dere03g1075 1189 SUPERFAMILY Calcium ATPase, transduction domain A 138 280 IPR008250 -
Dere03g1075 1189 SFLD C1.7: P-type atpase like 402 906 - -
Dere03g1075 1189 Pfam E1-E2 ATPase 131 355 - -
Dere03g1075 1189 Pfam Phospholipid-translocating P-type ATPase C-terminal 883 1133 IPR032630 -
Dere03g1075 1189 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 427 693 IPR023299 GO:0000166
Dere03g1075 1189 SUPERFAMILY HAD-like 415 910 IPR036412 -
Dere03g1075 1189 FunFam Phospholipid-transporting ATPase 112 282 - -
Dere03g1075 1189 ProSitePatterns E1-E2 ATPases phosphorylation site. 422 428 IPR018303 -
Dere03g1075 1189 Pfam Phospholipid-translocating ATPase N-terminal 40 101 IPR032631 -
Dere03g1075 1189 SUPERFAMILY Calcium ATPase, transmembrane domain M 46 1133 IPR023298 -
Dere03g1075 1189 FunFam Phospholipid-transporting ATPase 691 895 - -
Dere03g1075 1189 SFLD p-type atpase 402 906 IPR044492 -
Dere03g1075 1189 FunFam Phospholipid-transporting ATPase 533 691 - -
Dere03g1075 1189 CDD P-type_ATPase_APLT_Dnf-like 53 1015 - -
Dere03g1075 1189 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 28 1146 - -
Dere03g1075 1189 NCBIfam HAD-IC family P-type ATPase 821 938 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Dere03g1075 1189 PRINTS P-type cation-transporting ATPase superfamily signature 855 874 - -
Dere03g1075 1189 PRINTS P-type cation-transporting ATPase superfamily signature 420 434 - -
Dere03g1075 1189 PRINTS P-type cation-transporting ATPase superfamily signature 741 751 - -
Dere03g1075 1189 Pfam Cation transport ATPase (P-type) 522 617 - -
Dere03g1075 1189 Gene3D - 110 282 - -
Dere03g1075 1189 NCBIfam phospholipid-translocating P-type ATPase 51 1140 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016020|GO:0140326
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere03g1075 Dere-ChrDere03 17129019 17135724 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere03g1075 10 1178 Primary Pumps ATPases AT1G68710 69.735 0.0 1773