Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g1070 ATGGCAATGGCAAAGCTGGCGATGGAGATGCCTACTGCTGCTTCAGCAACTGCTAGGCCTTCCCTTCTAGCTCCTTCAGCTTCCACTTCGCCTCACACAGTCAACGCTTTCTCCAAACCCCATCTCAGACGTGCCTGTATTTCGCTGCCCACATCAACCACCATTTCACTGTTGGCTCTCTTCGCTCCTCCCAATGAAGCCAAGGCTCTCAGCATCTCCAAGGAGCAGATTGTCTCCTCTCTCACTGAAGTGGAGAAGACGATCGATCAAGTTCAGGAGGCGGGTTCGGGTGTCGTGGATACGACCCAGCGTGTTCTTGAAGTTTTAGGGAATGCTTTGAAGCCTGCCCTAGACAAGGCGTTGCCGATTGTACGGCAGGCCGGAGAAGAGGCCTTAAAAGTTGCTTCGCCGGCCATCTCCGAGGCTTCCAAAAAGGCCCAAGAAGCACTTCAAAGCACCGGTGTTGATACTGAGCCAGTCCTCAATGCTGCTAAGACTGTAGCAGATGCTGCGCAACAAACAGGCAAGGTGATTGAAGATGCCAAACCAATAGCTTCAACAACTGTTGAAACCATATCTTCTGCAGATCCTGTTGTGATAGCAGGAACAGCTGGAGCAATTTTTCTTGCATACCTCCTGTTTCCTCCTATCTGGTCTGTCATCACCTTTAACCTTCGTGGTTACAAAGGTGAGCTTACACCTGCTCAAACCCTTGATCTCTTATGTACACAAAACTACGTTATGGTCGATATCAGGTCAGAAAAGGATAAGAACAAGGCTGGTATTCCTCGCCTTCCCTCTGGTGCTAAAAACAGGATGATTGCCATACCGTTAGAAGAACTACCTAGTAAGCTGAGAGGCCTGGTCAGAAATGTGAAGAAAGTAGAAGCTGAAATAGCAGCTTTGAAGATATCATACCTCAAGAAAATAAACAAAGGCACCAATATTGTGATCATAGACTCGTACTCGGACTCAGCGAAAATAGTTGCAAGAACACTAACCAACCTTGGCTTTAAGAACTGCTGGATTGTTGCTGATGGGTTTTCTGGAAGCAAAGGGTGGTTACAGAGCAGATTAGGAACAGATTCATACAATTTATCATTTGCAGAGGTTCTGTCACCAACCAGAGTCATCCCTGCGGCAGTGAGCCGTTTTGGTACAACCAGCGGAAAACTTCTTCCTGGGACTGATTGA 1194 0.4765 MAMAKLAMEMPTAASATARPSLLAPSASTSPHTVNAFSKPHLRRACISLPTSTTISLLALFAPPNEAKALSISKEQIVSSLTEVEKTIDQVQEAGSGVVDTTQRVLEVLGNALKPALDKALPIVRQAGEEALKVASPAISEASKKAQEALQSTGVDTEPVLNAAKTVADAAQQTGKVIEDAKPIASTTVETISSADPVVIAGTAGAIFLAYLLFPPIWSVITFNLRGYKGELTPAQTLDLLCTQNYVMVDIRSEKDKNKAGIPRLPSGAKNRMIAIPLEELPSKLRGLVRNVKKVEAEIAALKISYLKKINKGTNIVIIDSYSDSAKIVARTLTNLGFKNCWIVADGFSGSKGWLQSRLGTDSYNLSFAEVLSPTRVIPAAVSRFGTTSGKLLPGTD 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g1070 397 Gene3D - 229 368 IPR036873 -
Dere03g1070 397 PANTHER RHODANESE/CELL CYCLE CONTROL PHOSPHATASE SUPERFAMILY PROTEIN 15 361 IPR044690 GO:0009704|GO:0071277|GO:0090333
Dere03g1070 397 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 209 350 IPR036873 -
Dere03g1070 397 Coils Coil 285 305 - -
Dere03g1070 397 ProSiteProfiles Rhodanese domain profile. 242 363 IPR001763 -
Dere03g1070 397 CDD RHOD 236 350 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere03g1070 1 321 Sulfurtransferasese or Rhodanese AT5G23060 71.517 9.04e-159 447
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere03g1070 03 16992332 16994738 Dere03g1070 03 16992332 16994738 ECH