Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g1055 ATGAACAACCCATCATCAGATGACCCCGAGCTTCTGATGAGGAAGAGGAAATACAGCAACAGCAGCAGCTCGGAAGGTTCGAGAAAAGGAAGAAGGTTCAAGAACGAAGTAGATCAAGAAAGGCATCGCAGCAGCAGCAGCAACAACAACAAAGGATTATCATCAGTGTCGACCACTTTGAGGCTGTACGAGGATCCATGGAAGATAAAGAAGACGCTGACGGAGAGCGATCTGGGAATCCTAAGCAGGCTGCTTTTGGCTGCAGATTTGGTGAAGAAGCAGATGCTGCCAATGCTCGGCGCCAAGAATGCAAGAGCCGCCGAGACGCAGGAAGGCACGGTGGTTAGGGTTCGAGACATGGACACCAGATCCATGCACCAGCTGCTTCTGAAGCGATGGTCTTCTTCCAAGAGCTATGTTCTTATTGGGAAGTGGAACCAGGACTTCGTCAGGAGGAGGGAGCTGAAGAAAGGTGATGAGATCGGCTTCTACTGGGACCCTTATACCTCCCTCTTCAACTTCTGTGTTCTCAAGCGTGCAAATTAG 546 0.5037 MNNPSSDDPELLMRKRKYSNSSSSEGSRKGRRFKNEVDQERHRSSSSNNNKGLSSVSTTLRLYEDPWKIKKTLTESDLGILSRLLLAADLVKKQMLPMLGAKNARAAETQEGTVVRVRDMDTRSMHQLLLKRWSSSKSYVLIGKWNQDFVRRRELKKGDEIGFYWDPYTSLFNFCVLKRAN 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g1055 181 SUPERFAMILY DNA-binding pseudobarrel domain 66 176 IPR015300 -
Dere03g1055 181 MobiDBLite consensus disorder prediction 27 45 - -
Dere03g1055 181 Gene3D - 66 180 IPR015300 -
Dere03g1055 181 MobiDBLite consensus disorder prediction 1 55 - -
Dere03g1055 181 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 37 179 - -
Dere03g1055 181 CDD B3_DNA 67 178 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere03g1055 Dere-ChrDere03 16707263 16707808 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere03g1055 69 164 RAV Transcription Factor Family AT1G50680 35.922 1.33e-08 51.6