Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g1047 ATGGAGGCTAACACAACACTAAACCAACAGCATCTTCACAATCCTTTTTCTGCTCAGAAACCAATTTTGACCTCAAGCTTGCTCAACATGGAAACAGGAGAAAGCCATGAAGGTTCTTATGTCTTAGCTCATCTTGACCCGTCTCAAGGTTTACACTACATTCCATTTTACTACTCCCAGTTACACTTTCCAAACAATCCAATTCAGTTTATAGACCATAAACACTCTCCAAACACATCATCTAACAGTAACAACAATACCAACAACAACAACAACAATTCTGGTGAAGCCAAGACTGTTGCTGATGACAGAAAGAAGAAAAGAATGTTCTCCAACCGAGAATCTGCTCGCCGGTCCAGGATGAGGAAGAAGCAGCAGATAGAGAACCTTCAGTACCAAGTAGATCATCTTCAGACCATGAATCATCAACTTTCCCAGAAGATCATTTACCTGTTGGAATGTAACCAGCAGATCCTCCAGCAGAATGCTCAGCTCAAAGAGAAAATTTCTTCACTTCAATTGGTTCTCTCTGACTTGTTAGTTCCTCTTGCTCACGATGATGAAGCTACTCACATCTCCAATGCCCTCATGGCCGAGCCTTCAGCTCCTCCAGTTGCTAGTTCCGGAGCACAGTGTTTCAAGTAA 645 0.4248 MEANTTLNQQHLHNPFSAQKPILTSSLLNMETGESHEGSYVLAHLDPSQGLHYIPFYYSQLHFPNNPIQFIDHKHSPNTSSNSNNNTNNNNNNSGEAKTVADDRKKKRMFSNRESARRSRMRKKQQIENLQYQVDHLQTMNHQLSQKIIYLLECNQQILQQNAQLKEKISSLQLVLSDLLVPLAHDDEATHISNALMAEPSAPPVASSGAQCFK 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g1047 214 CDD bZIP_plant_GBF1 105 153 IPR045314 GO:0003700|GO:0006355
Dere03g1047 214 Pfam bZIP transcription factor 103 162 IPR004827 GO:0003700|GO:0006355
Dere03g1047 214 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 107 122 IPR004827 GO:0003700|GO:0006355
Dere03g1047 214 SMART brlzneu 100 164 IPR004827 GO:0003700|GO:0006355
Dere03g1047 214 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 102 165 IPR004827 GO:0003700|GO:0006355
Dere03g1047 214 MobiDBLite consensus disorder prediction 69 124 - -
Dere03g1047 214 MobiDBLite consensus disorder prediction 98 124 - -
Dere03g1047 214 MobiDBLite consensus disorder prediction 69 97 - -
Dere03g1047 214 SUPERFAMILY Leucine zipper domain 104 160 IPR046347 GO:0003700|GO:0006355
Dere03g1047 214 PANTHER BASIC LEUCINE ZIPPER 43-RELATED 63 188 IPR044521 -
Dere03g1047 214 Coils Coil 155 175 - -
Dere03g1047 214 Coils Coil 113 147 - -
Dere03g1047 214 Gene3D - 103 156 - -
Dere03g1047 214 FunFam BZIP transcription factor 102 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere03g1047 Dere-ChrDere03 16567483 16568127 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere03g1047 102 210 bZIP Transcription Factor Family AT5G60830 53.153 8.30e-32 113
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Dere03g1047 bZIP_1 5.9e-13 CL0018
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere14g0346 14 3554728 3557018 Dere03g1047 03 16567483 16568127 CCT