Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g1026 ATGGAAAGAATTCTGGAGCGGTATGAGAGGTATTCGTACGCAGAGAGGCAGCTAGCTGCAAGTGATCAAGAACCCAATGTACAAGAAAACTGGACTCTGGAACACGCTAAGTTGAAGGCTAGGATAGAGGTTCTACAAAGAAATCAAAGGCATTTTATGGGAGAAGGTCTGGATGGGCTAAGTCTCAAAGAGCTTCAGAATCTGGAGCACCAGCTTGATACTGCTCTAAAACACATCAGATCACGAAAGAACCAAGTCATGCATGAATCTATCTCAGAGCTTCAGAAGAAGATAAAGGAGAAAGAGAAGGCACTGGCCCAACAGGCACAAGCACGACTGGAGCAACGAAATCATCAAGAGGTGGATGATTGCTCTGTTCTTCTCCCACCACAGCCATTGCAGCCCTTGAATATTCTCAGTGGGTCCCCAGGAGTAAGTGGTGAAGGAGGATATTACGATGGACCTCCAAATCAACCTCGAGCTAATACACTGCTTCCATGGATGCTACGTCTTTGA 516 0.4612 MERILERYERYSYAERQLAASDQEPNVQENWTLEHAKLKARIEVLQRNQRHFMGEGLDGLSLKELQNLEHQLDTALKHIRSRKNQVMHESISELQKKIKEKEKALAQQAQARLEQRNHQEVDDCSVLLPPQPLQPLNILSGSPGVSGEGGYYDGPPNQPRANTLLPWMLRL 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g1026 171 ProSiteProfiles K-box domain profile. 28 115 IPR002487 GO:0003700|GO:0005634|GO:0006355
Dere03g1026 171 MobiDBLite consensus disorder prediction 139 165 - -
Dere03g1026 171 Coils Coil 65 119 - -
Dere03g1026 171 Coils Coil 28 48 - -
Dere03g1026 171 Pfam K-box region 24 103 IPR002487 GO:0003700|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere03g1026 Dere-ChrDere03 16201927 16205038 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere03g1026 1 170 MADS-box Gene Family AT5G60910 51.613 9.95e-48 151