Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g1018 ATGAAGGAACATAACATGACCGTTGGCCAAAGTCTGTTCCTCATGATAATCATTGTCGCTTTCCTTCTCCAAGTTTTCTTGTGCCTTTGTCACCGGTATCGCTATCGCCGTCACCCCGGCGACGTTGCCGACATCCCACTCCCGTCCCCTCGTCTTCCTCTTCCTCCTCCATATAACGCGCGCCTTAACCCTTCCCTCTTCAAGTTCCTACCCACCTTAACATACTCCTCCGCCGCCTTCCCCGGCCTTCGGCATCCGCATTGCGCCATCTACTCGTCGGAGTTCAAAGAAGGCGACAGAGGGCGTTTGCTCCCGAACTGCAGCCATGTTTTTCACTGCCATTGCATCGATGCGTGGTTTCGATCACACTCCAATTGTCTGGTGTGCCAAGCGCCGGTCCGACCGCCACAGAATGGAAGTACAGAAGCGTCTATGTCTGAGGGTTACTAA 450 0.54 MKEHNMTVGQSLFLMIIIVAFLLQVFLCLCHRYRYRRHPGDVADIPLPSPRLPLPPPYNARLNPSLFKFLPTLTYSSAAFPGLRHPHCAIYSSEFKEGDRGRLLPNCSHVFHCHCIDAWFRSHSNCLVCQAPVRPPQNGSTEASMSEGY 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g1018 149 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 11 134 IPR044675 -
Dere03g1018 149 Pfam Ring finger domain 87 130 IPR001841 -
Dere03g1018 149 SUPERFAMILY RING/U-box 83 136 - -
Dere03g1018 149 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 58 136 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere03g1018 Dere-ChrDere03 16072371 16072820 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere03g1018 62 147 Rapid Response to Elicitors AT4G15975 44.186 5.99e-19 78.2