Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g1016 ATGGAGTCCACGGGGATATCGTTCACTGGATCTGTTGCCTCCCGTTGTGGCATCGCATTCTTGCTCGTGTTACTCTTCTCTTGCTCCACATTCACTTCTACAGAAGCCTATGATCCACTTGATCCAACTGGAAACATAACAATCAAATGGGATGTGATAAGCTGGACTGCAGATGGTTATGTTGCTGTTGTTACAATGTACAACTTTCAACAGTATCGGCACATTCAGTCCCCCGGGTGGACATTAGGGTGGACATGGGCTAAAAAGGAAGTGATTTGGAGCATGATGGGAGGCCAAACCACAGAGCAAGGTGACTGCTCAAAGTTCAAAGGGAACCCTCCACATTGCTGCAAGAAGGATCCAACAGTGGTGGATCTACTTCCCGGAACTCCTTACAATCAGCAGATTGCAAATTGCTGCAAAGGGGGAGTATTGAATTCATGGGCTCAGGACCCAGCCACTGCAATAAGTTCATTTCAGGTCAGTGTTGGTCTTGCTGGAACAACCAACAGAACTGTCAAATTGCCTAAAAATTTCACCCTCAAAGCACCAGGGCCTGGATACACTTGTGGTCCTGCCAAGATTGTGAAACCAACCAAGTTTGTCACCAATGACAAAAGGAGAACCACTCAAGCATTGATGACCTGGAATGTTACCTGCACATATTCTCAATTCCTTGCTCAAAAGACCCCAAGCTGCTGTGTCTCTCTCTCATCCTTCTATAATGATACCGTAGTAAACTGCCCAACCTGCACATGTGGCTGTCAAAACAAAACAGAACCTGGAAGCTGTGTAAATCCAGATTCCCCACATTTAGCCTCGGTTGTGGCATCTTCAAGCAAAGCTAGCAATACACCTCTTGTACAGTGCACCAGCCATATGTGTCCAATTCGAGTGCATTGGCATGTGAAGCTCAATTATAAAGAGTACTGGAGAATCAAGATCACAATCACAAATTTCAATTACAGGATGAACTATTCACAATGGAACCTTGTTGTGCAGCACCCCAATTTTGACAATCTGACCCAGCTTTTCAGCTTTAATTACAAGTCATTAACACCTTATGAGGGATTAAATGATACTGGCATGCTCTGGGGAGTGCAGTTCTATAACGATTTCCTCTCTTCAGCTGGAGAAATAGGGAATGTACAGTCAGAGCTCTTATTTAGAAAAGACTCATCAACCTTCACATTCGAAAAGGGTTGGGCTTTCCCCAGAAGAATCTATTTCAATGGAGATAACTGCGTTATGCCTCCTCCAGATGCTTACCCATGGCTGCCAAATGCATCTTCAAAACTAGTCTTCTCCGTACTGACTACAGCCATAGCCACCTTTGCTTCTTTGGCAATCTTATTCGCTAATTTATAG 1368 0.4437 MESTGISFTGSVASRCGIAFLLVLLFSCSTFTSTEAYDPLDPTGNITIKWDVISWTADGYVAVVTMYNFQQYRHIQSPGWTLGWTWAKKEVIWSMMGGQTTEQGDCSKFKGNPPHCCKKDPTVVDLLPGTPYNQQIANCCKGGVLNSWAQDPATAISSFQVSVGLAGTTNRTVKLPKNFTLKAPGPGYTCGPAKIVKPTKFVTNDKRRTTQALMTWNVTCTYSQFLAQKTPSCCVSLSSFYNDTVVNCPTCTCGCQNKTEPGSCVNPDSPHLASVVASSSKASNTPLVQCTSHMCPIRVHWHVKLNYKEYWRIKITITNFNYRMNYSQWNLVVQHPNFDNLTQLFSFNYKSLTPYEGLNDTGMLWGVQFYNDFLSSAGEIGNVQSELLFRKDSSTFTFEKGWAFPRRIYFNGDNCVMPPPDAYPWLPNASSKLVFSVLTTAIATFASLAILFANL 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g1016 455 PANTHER PROTEIN COBRA 25 441 IPR006918 GO:0010215|GO:0016020
Dere03g1016 455 PIRSF COBRA 10 455 IPR006918 GO:0010215|GO:0016020
Dere03g1016 455 Pfam COBRA-like protein 60 223 IPR006918 GO:0010215|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere03g1016 Dere-ChrDere03 16061392 16064940 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere03g1016 9 455 COBRA Gene Family AT3G02210 72.991 0.0 712
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere03g1016 03 16061392 16064940 Dere03g1016 03 16061392 16064940 ECH