Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Dere03g1010 | ATGTTCGAGGACTTCCTGGGCGGCTCCACTGCCACATTGGCAGCAACTACGGCACCTCCACCGCCTACTCCTCAGTTCGCCATTGCCAATATATTCAATTCTGAACTAAAAAAACATAACCTCTGGCTTCCACCCAGGCTTGGACACCACCGAACAAGCCGAGCTGTAAAAAGAGGCACTGGCTCCGACCAACGCACCTCCATATACCGTGGTGTCACCCGGCATAGGTGGGCCGGGAGATATAAAGCTCATCTGTGGGATAATAGTTGTAGAAGAGAAGGGCAAAGTAGGAAAGAAAGGCAAGTTTACTTGGGTGGCTGCGATAAGGAATAG | 333 | 0.5105 | MFEDFLGGSTATLAATTAPPPPTPQFAIANIFNSELKKHNLWLPPRLGHHRTSRAVKRGTGSDQRTSIYRGVTRHRWAGRYKAHLWDNSCRREGQSRKERQVYLGGCDKE | 110 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Dere03g1010 | 110 | ProSiteProfiles | AP2/ERF domain profile. | 68 | 110 | IPR001471 | GO:0003700|GO:0006355 | |
| Dere03g1010 | 110 | Gene3D | AP2/ERF domain | 68 | 110 | IPR036955 | GO:0003700|GO:0006355 | |
| Dere03g1010 | 110 | PANTHER | AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR | 38 | 110 | - | - | |
| Dere03g1010 | 110 | MobiDBLite | consensus disorder prediction | 43 | 67 | - | - | |
| Dere03g1010 | 110 | MobiDBLite | consensus disorder prediction | 1 | 22 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Dere03g1010 | Dere-ChrDere03 | 15995488 | 15995820 | Transposed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Dere03g1010 | 64 | 110 | AP2-EREBP Transcription Factor Family | AT5G57390 | 91.489 | 1.29e-25 | 97.1 |