Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g1009 ATGTCATCGGAATTTTGCTCTCTGTTCTTCCCACCATCTGGGTCTTCCAACGAACTCACCTTCAACTTCTTCGTCGGTTTTCTCGTTCTTGCCGCTGTGTTTGGTTACTGGCTTGTTCCAGGGGGTCTCGCTTGGGCTCTGTACAAGCTTCGTCGTCAAGCTCACCACGGAACCGCCATTCCTGGACCTTCGGGTCTGCCTCTGTTTGGCCTTGTTTTCGCTTTTACAGGAACTCTGACTCATAAAATCCTTGCCAAACTCGCAAATACATTCAAGGCCAAGCCGTTGATGGCATTCTCGGTCGGGTTCACTCGGTTCATCATCTCGAGCCATCCTGACACAGCCAAAGAGATTCTGAACAGTTCAGCTTTCGCGGATCGACCCATTAAGGAGTCCGCCTACGAGCTTCTCTTCCACCGAGCAATGGGCTTCGCACCGTTCGGAGAGTACTGGAGGAATCTCAGGAGAATCTCAGCGACCCATTTGTTCTCTCCCAAGAGAATCGCTTCCTTCGGGGATTTCCGAGCTAGAGTCGGGCTCCAAATGGTGGGTCAGATCAGAGACTTGATGGAGAAAAACGGCGAGGTCAAGGTGAGGGAAGTGTTGCATTTTGGGTCGCTAAACAACGTGATGATGAGTACGTTTGGAAGGAGTTACGAATTTGGTGAGGGTTGTGATGGTGGGTGTGAGCTTGAGGGGCTGGTGAGAGAAGGGTACGATCTGCTTGGGGTTTTCAATTGGAGCGACCACTTTCCTTTTCTGGGTTTGCTTGATTTACAGGGGGTGAGGAGGAGGTGCAGAAATCTGGCGGCGAGAGTGAATGTTTTCGTTGGGAAAATCATAGAGGAGCACAGGATGAAAAGGACTCAAAATGAACCTAGCACAATCACGGACGAAGAAGAAGCTTCTAGTGGTGATTTTGTTGATGTGCTTCTAGATTTGGCCAAGGAGAATAGGCTTAATGACTCTGATATGGTCGCTGTATTGTGGGAAATGATCTTCAGGGGAACTGATACAGTGGCAATTCTTCTTGAGTGGATTCTAGCGAGAATGGTATTGCACCCAGAACTCCAATCCAAAGCACAGTCTGAAATTGACAGTGTCACTGGCTCTTCTCGCTGTGTGTGTGACCATGACCTTCCAAAGCTCCCTTATGTGCGAGCCATAGTGAAGGAAACCCTGAGGATGCACCCACCTGGTCCTCTCCTATCCTGGGCTCGCCTGGCCATCCACGACACCAACGTAGGCCACTACTTCGTGCCCGCAGGAACCACCGCCATGGTCAACATGTGGGCCATAACCCACGACCCAGACGTGTGGTCCGAGCCATCAGAGTTCAAGCCAGAGCGGTTCATGCAGGAGGATCATCAGGATGTAGCCATCATGGGGTCTGATCTGAGACTGGCTCCTTTTGGCTCGGGAAGAAGGGTGTGCCCTGGGAAAGCCATGGGCTTAGCCACTGTCGAGCTGTGGCTTGCTCTGTTGCTGCAGAACTTCAAATGGGTCCCTTCTGATGATGATGGTTCTGGCGTGGACTTGTCTGAGTGCTTGAAGCTCTCTTTGGAGATGAAACACTCTCTGGTCTCCAAGGCCATTCCACGGACTCCATGA 1611 0.5127 MSSEFCSLFFPPSGSSNELTFNFFVGFLVLAAVFGYWLVPGGLAWALYKLRRQAHHGTAIPGPSGLPLFGLVFAFTGTLTHKILAKLANTFKAKPLMAFSVGFTRFIISSHPDTAKEILNSSAFADRPIKESAYELLFHRAMGFAPFGEYWRNLRRISATHLFSPKRIASFGDFRARVGLQMVGQIRDLMEKNGEVKVREVLHFGSLNNVMMSTFGRSYEFGEGCDGGCELEGLVREGYDLLGVFNWSDHFPFLGLLDLQGVRRRCRNLAARVNVFVGKIIEEHRMKRTQNEPSTITDEEEASSGDFVDVLLDLAKENRLNDSDMVAVLWEMIFRGTDTVAILLEWILARMVLHPELQSKAQSEIDSVTGSSRCVCDHDLPKLPYVRAIVKETLRMHPPGPLLSWARLAIHDTNVGHYFVPAGTTAMVNMWAITHDPDVWSEPSEFKPERFMQEDHQDVAIMGSDLRLAPFGSGRRVCPGKAMGLATVELWLALLLQNFKWVPSDDDGSGVDLSECLKLSLEMKHSLVSKAIPRTP 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g1009 536 PANTHER CYTOCHROME P450 78A7-RELATED 19 535 - -
Dere03g1009 536 FunFam Cytochrome P450 78A5 52 534 - -
Dere03g1009 536 Pfam Cytochrome P450 61 506 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere03g1009 536 SUPERFAMILY Cytochrome P450 60 534 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere03g1009 536 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 471 480 IPR017972 GO:0005506|GO:0016705
Dere03g1009 536 CDD CYP78 92 527 - -
Dere03g1009 536 Gene3D Cytochrome P450 47 532 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere03g1009 536 PRINTS P450 superfamily signature 388 399 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere03g1009 536 PRINTS P450 superfamily signature 335 352 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere03g1009 536 PRINTS P450 superfamily signature 469 478 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere03g1009 536 PRINTS E-class P450 group I signature 344 370 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere03g1009 536 PRINTS E-class P450 group I signature 429 453 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere03g1009 536 PRINTS E-class P450 group I signature 324 341 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere03g1009 536 PRINTS E-class P450 group I signature 478 501 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere03g1009 536 PRINTS E-class P450 group I signature 387 405 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere03g1009 536 PRINTS E-class P450 group I signature 468 478 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere03g1009 536 PRINTS E-class P450 group I signature 205 223 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere03g1009 Dere-ChrDere03 15969679 15971788 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere03g1009 9 534 Cytochrome P450 AT1G74110 65.672 0.0 698