Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g1004 ATGGCAGCAAAGCTCCTCCACTCTTTAGCAGATGACAACCCAGATTTACAGAAGCAGATAGGATGCATGACTGGGATTTTCCAACATTTTGATCGTCATCATATTCTTACTGCTCGACGAGTTTACCAGAAGCGGCTTCCTCCTCCTGCTAATCGTCTAAGTGGAAATTCTCACTGTGGTGATGGCAGCCTGGAAAATGACTCTAATAATGTAAACCGACAACAAACAGCATCTGATGCAAGTTTAAACAAGGGTTTTAGTGAGAAACAAAGGATTTCCACAGAGTCATCAAGAGCCTCCTTCTCCTCTTCATGTTCATCATCCTTGTCCCCTCTGGATTGCAGAGCTCAAGTGGAGGCTCCCTTTGACTGCATTATTTATCCTGAGACTCATTCAAGGGAACCAATTATGAACCAAACAACCATGTCTCCCCATTTAGGACAGCAATCTCTTGACCTGAGGGATGTGGTGAAGGACTCTATGTATAGGGAGGCCAGAGGACTGTCAGTGAAGACTACAGCCAAAGAAGAAGCTGCCATTCATGCTATGAAGCGTGGGGACTCCCCAAGACCTCTGCATCTGTCGAAATCTGGTGATGGATCTCATGGAGTTGGGATAGATGGGAGGAAAAGTGTGCCTGCTGATCTAAAGGAGTCTCTCAGAGTTCTTGCTAAACTTAGAGAAGCACCATTGTATTATGGTGAAGCTAGGGAATTTTCAAGATCATCCTATGAAGTCCAAGATGGACACTGCCATTCAATCTCAAAGGATGCTCCTTGGTTTTCATATGATGGAAGAGAAAGAAGTCGATTATTGTTTGAATCAAGAGATACAATCAAAGGCCCAACAAAGCTAAAAGAGTTGCCGAGACTTTCACTGGACAGCAGGGAAGGCTCATGGTGCACTAATAGCTCTGATACAAAATCCAATCACCTCTCAAGGGGTCTTGGCAGTGGCACCTCCATGTCAGATGACAAAATCTCTAGTCTACCAGAGTCTTCAACAGCCCAGAGGCGGCCTCCAAGTGTTGTAGCGAAATTAATGGGCTTGGAAGCATTGCCAGATTCCTATATGGCTGTTGATACTCGGTTGAATTTGAGTGAAACTCCCTCAGCTCAATATGATGATCAGTTTCCAAGATCATCAAAAACTGGACTAGTCAGGCCACTCAAAGTTTTTAATTCCCTTAAAAGCTCTTTGAAAGACCCAACTTCACCACAGCGAAAGAATCCTGATTTAATTATGAAGCCTATGTCAAGTTCAAGATTTCCCATTGAACCAGCACCGTGGAAGCAACAGGATGGAAATCAAAACTCTCAGAAATCAAGTTTCAAGGCCGTGAAAACTCCAGCAAGAACAACAGATTCATTTCCTTCAGTTTATAGTGAGATCGAGAAGAGATTGAAGGATCTTGAGTTCAAACAATCTGGAAGGGACCTCAGAGCACTCAAACAGATATTGGAGGCAATGCAAGCAAAGGGACTGTTAGAGACTAGAGAACAAGAACAAGCCTTATATGTTGGAAGTCAAAGAGACAATGGAACAAATACTACGAGTCTGATTCAGAATCCTAGATCAGTAAGGCAACTAAATCCACATTGCGACAATAATCTATCATCTTCCTCAAAGAGGGGAGCAGACTCAGCAAGGGCTTGTGAATCCCCAATTGTGATCATGAAACCAGCAAAACTTGTTGAGAAAACTGGGATTGCTGCTTCTTCAGTAATTCCAATGGGCAGACTTTCTGGTGCCCTTAAACTTGACAGTGGTACCAGTGAAGATAAGAAAAAGGTTGCATCTTCTAGGCGAATAGCAAAAGATTACTCTCCTATAAACAGTCGCAGAGGTGCTGCTGCCAGTTCCAATGATAGGAAAGCTAGTAATACCAAGACTAAATCTTCACAATCTCAACCATGGTCTCAACAAATTTCAAATGAAAATAGCCCAAGTTCAGGAAAGAACTCTAGCTCTGTGAGCCCAAGGTTGCAACAGAAGAGGCTAGAGTTTGATAGGCGATCTTGCCCACAAACCCCACCATCAGATTCACATAAATCCAGAAGGAAATCCAGTAGGCAAGCAACAGATTCTGGTTCTCCAGGTGGAAAACTCAGACCAGAATCCTCCAACTTAGAGCACATTGATGACCCAGTGAATCAGATAAGAAAAGAATCAGAAGCATTAAGTTGCCAAAGTGATGAAATATCTATGCAGTCTGACAATATCACAGTCTCAGACTCAAAGATGGATATGGAAGTAAGCAGCTGCTTACAATCTGCTGAAGCTAGTGATAGCCAGAGCCCATCCGTGAAAACTATGAAGCAACCTATTTCAGGATCAATGCAGATGAAATCAATTTCAAGGTTGGATGAGGATGACTCAGTTGTAGATCTTGCAACAAATTCCGAAGACCATCCTAGCCCTGTCTCAGTTCTTGATGGCTCTGTATGCAGAAACGATGAACCTTCTCCAGTAAAGCAGATATCTGATGCTCCCAAAGCTGACAATGCCCAAGAGTATATAGGAAATGAGAATGAAGACTGGTGGAATCCTGTGAATAAGTTAATTTACAGCGCAGGATCTGGTGAGATTAATCACAAGAAACTCCAGAGCATAGATCACCTTGTTCAGAAGCTTAGACGGGTGAACACCAGTCATGATGAATCTAGAATTGATTACATTGCTTCCCTTTGTGAAAATACAAGTCCTGACCAAAGATACATCTCTGAAATATTATTAGCTTCAGGTCTCCTACTAAGAGACCTGAGCTCTGAGCTGCTTACATTTCAACTTCACTCTTCAGGTCATCCCATCAACCCCGAGTTATTTTTTGTGTTGGAGCAAACCAAGGCAAGTAGTTTCCTTCCGAAAGATGAATGCAGCTCGGGAAAAGTTGCTTACTTGAAACTAAATGCAGGGAAATTTCACAGGAAACTCATTTTTGATGCCGTGAATGAGATTCTTGGGGTAAAGTTGGCTTTAGTTTGCTCTTCTCCTGAACCTTGGGTGAAGCCTAGCAGACTCACTAAGAAAACCCTCAGTGCACAAAAGCTTCTTAAAGAACTATGCTTTGAGATAGACAAAGTCCAATCCAAGAAGCCAGAATGTAGTTTAGAAGATGAAGAAGATGGTCTCAGAAGTGTACTCTGGGAAGATGTGATTTATGGCTCAGAGAGTTGGATAAATTTCCATGATGAAATATCTGGGGTTGTGTTAAACGTTGAGAGATTGATATTTAAGGATTTGGTTGATGAGATTGTGATTGGTGAAGCAGCTGGTCCTCGAACTAAGCCGGGTAGGCGCAGGAAGTTGTTTGGTAAGTAG 3321 0.4258 MAAKLLHSLADDNPDLQKQIGCMTGIFQHFDRHHILTARRVYQKRLPPPANRLSGNSHCGDGSLENDSNNVNRQQTASDASLNKGFSEKQRISTESSRASFSSSCSSSLSPLDCRAQVEAPFDCIIYPETHSREPIMNQTTMSPHLGQQSLDLRDVVKDSMYREARGLSVKTTAKEEAAIHAMKRGDSPRPLHLSKSGDGSHGVGIDGRKSVPADLKESLRVLAKLREAPLYYGEAREFSRSSYEVQDGHCHSISKDAPWFSYDGRERSRLLFESRDTIKGPTKLKELPRLSLDSREGSWCTNSSDTKSNHLSRGLGSGTSMSDDKISSLPESSTAQRRPPSVVAKLMGLEALPDSYMAVDTRLNLSETPSAQYDDQFPRSSKTGLVRPLKVFNSLKSSLKDPTSPQRKNPDLIMKPMSSSRFPIEPAPWKQQDGNQNSQKSSFKAVKTPARTTDSFPSVYSEIEKRLKDLEFKQSGRDLRALKQILEAMQAKGLLETREQEQALYVGSQRDNGTNTTSLIQNPRSVRQLNPHCDNNLSSSSKRGADSARACESPIVIMKPAKLVEKTGIAASSVIPMGRLSGALKLDSGTSEDKKKVASSRRIAKDYSPINSRRGAAASSNDRKASNTKTKSSQSQPWSQQISNENSPSSGKNSSSVSPRLQQKRLEFDRRSCPQTPPSDSHKSRRKSSRQATDSGSPGGKLRPESSNLEHIDDPVNQIRKESEALSCQSDEISMQSDNITVSDSKMDMEVSSCLQSAEASDSQSPSVKTMKQPISGSMQMKSISRLDEDDSVVDLATNSEDHPSPVSVLDGSVCRNDEPSPVKQISDAPKADNAQEYIGNENEDWWNPVNKLIYSAGSGEINHKKLQSIDHLVQKLRRVNTSHDESRIDYIASLCENTSPDQRYISEILLASGLLLRDLSSELLTFQLHSSGHPINPELFFVLEQTKASSFLPKDECSSGKVAYLKLNAGKFHRKLIFDAVNEILGVKLALVCSSPEPWVKPSRLTKKTLSAQKLLKELCFEIDKVQSKKPECSLEDEEDGLRSVLWEDVIYGSESWINFHDEISGVVLNVERLIFKDLVDEIVIGEAAGPRTKPGRRRKLFGK 1106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g1004 1106 MobiDBLite consensus disorder prediction 296 340 - -
Dere03g1004 1106 MobiDBLite consensus disorder prediction 431 450 - -
Dere03g1004 1106 MobiDBLite consensus disorder prediction 584 716 - -
Dere03g1004 1106 Pfam DUF761-associated sequence motif 328 357 IPR032795 -
Dere03g1004 1106 MobiDBLite consensus disorder prediction 509 547 - -
Dere03g1004 1106 Pfam Domain of unknown function (DUF4378) 904 1084 IPR025486 -
Dere03g1004 1106 MobiDBLite consensus disorder prediction 397 450 - -
Dere03g1004 1106 MobiDBLite consensus disorder prediction 56 110 - -
Dere03g1004 1106 PANTHER LONGIFOLIA PROTEIN 1 1104 IPR033334 GO:0051513
Dere03g1004 1106 MobiDBLite consensus disorder prediction 296 341 - -
Dere03g1004 1106 MobiDBLite consensus disorder prediction 798 831 - -
Dere03g1004 1106 MobiDBLite consensus disorder prediction 182 210 - -
Dere03g1004 1106 MobiDBLite consensus disorder prediction 756 777 - -
Dere03g1004 1106 MobiDBLite consensus disorder prediction 46 110 - -
Dere03g1004 1106 MobiDBLite consensus disorder prediction 509 550 - -
Dere03g1004 1106 MobiDBLite consensus disorder prediction 589 603 - -
Dere03g1004 1106 MobiDBLite consensus disorder prediction 614 663 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere03g1004 Dere-ChrDere03 15873674 15878632 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere03g1004 145 1105 TRM (TON1 Recruiting Motif) Superfamily AT1G74160 47.005 0.0 665
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere03g1004 03 15873674 15878632 Dere03g1004 03 15873674 15878632 ECH