Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g0980 ATGGCTTCCGTCCCATCCCCTTGGCTTCTTGGCCTGGCTACTCTAGTGTTAGCCGGCCTCCTTTACCGACTTCTCAAGCTTTTCAATCGACCTTCCCTTCCTCTCCCTCCGGGTCCCACCCCATGGCCTATAGTCGGAAACATACCTCACATAGGTCCCGTGCCGCACCACGCTCTAGCCAACTTGGCTCGGATCCACGGCCCTCTCATGCACCTTCGGCTCGGTGTCGTTGATGTCGTGGTGGCGGCTTCGGCTTCGGTGGCCGAGCAATTCTTGAAGGTTCATGACGCCAATTTCTTGAGCCGGCCACCCAACGCCGGAGCTAAGTATTTGCTTTATAACTATCATGACCTCATATTCGCTCCCTATGGCCCACGTTGGCGGATGCTCCGGAAAATCAGCGCTGTCCATATGTTCTCCAGCAAGGCCTTGGAGGATTGCAGACACTTCCGTCAGGAAGAGGTGAGAAGACTGATACATAATCTCGCAAGTTCTAGCTCAAGCGTGGTGAATCTTGGGCAAATTGTGAACGTGTGCGTCACCAACGCGCTAGCAAGGGTGATGATAGGGCGGCGCGTGTTTGACGACAGCAGCGCCAGGAGCGATCTCAAGGCGGAGGAATTCAAGTCGATGGTGGTGGAGATGATGGAGCTGGGTGGAGTTTTCAATATTAGCGACTTCGTCCCGGCACTGGAGTGGCTCGACCTTCAGGGAGTGCATGGCAAGATGAAGAAGTTGCACAAGAGGTTCGATGCGTTCTTGACCAACATTATCGAAGAACACAAGGTTACCAACAGCCAGAACCACAAGGACTTGTTGACTACGTTGTTGTCGCTTAAGGAGGTCCAAAATGAGGAAGGAACCAGGCTCACCGATATCGAGATCAAAGGGCTGCTTTTGAACTTGTTTGCGGGTGGGACTGACACGACATCAAGCACATTAGAGTGGGCTATAGCAGAGTTGGTTAAACACCCAAAAATGTTGGCCCAGCTCCAAAAAGAGTTGGACTCCGTTGTGGGCCAAGACCGGGTCGTGACGGAATCGGACCTACCCAACCTACCCTACTTGCAGGCCGTTGTTAAGGAAACCTTTCGCCTCCACCCTGCAACCCCGCTTTCCCTTCCAAGAATTGCACAAGAGAACTGCGAGATGTTGGGCTACCATATCCCTAAGGGCGCCACTCTCATGATGAACATTTGGGCCATAGCCCGCGACCCGAATGAATGGTCGGATCCATTAGAGTTCAAGCCCGACAGGTTCTTGCCGGGCGGTGAGAAGCCTGACATTGATGTTAGAGGGTATGACTTTGAGGTGATCCCATTTGGTGCGGGCCGTAGGATTTGTCCTGGAATGAGCCTTGGGCTTTGCATGGTCCAGCTTCTAACGGCAACTCTGGCCCACGCTTTTGATTGGCAACTGCCACGTCATCTTGACCCTGAAAAGCTTGACATGGAAGAGGCTTATGGAATAACTCTCCAACGGAAAGTCCCCTTATCTGTGCACCCAAGGCCCAGGCTTGCGCCACGTGTATACTCTCAGTCTTCCTGA 1548 0.5317 MASVPSPWLLGLATLVLAGLLYRLLKLFNRPSLPLPPGPTPWPIVGNIPHIGPVPHHALANLARIHGPLMHLRLGVVDVVVAASASVAEQFLKVHDANFLSRPPNAGAKYLLYNYHDLIFAPYGPRWRMLRKISAVHMFSSKALEDCRHFRQEEVRRLIHNLASSSSSVVNLGQIVNVCVTNALARVMIGRRVFDDSSARSDLKAEEFKSMVVEMMELGGVFNISDFVPALEWLDLQGVHGKMKKLHKRFDAFLTNIIEEHKVTNSQNHKDLLTTLLSLKEVQNEEGTRLTDIEIKGLLLNLFAGGTDTTSSTLEWAIAELVKHPKMLAQLQKELDSVVGQDRVVTESDLPNLPYLQAVVKETFRLHPATPLSLPRIAQENCEMLGYHIPKGATLMMNIWAIARDPNEWSDPLEFKPDRFLPGGEKPDIDVRGYDFEVIPFGAGRRICPGMSLGLCMVQLLTATLAHAFDWQLPRHLDPEKLDMEEAYGITLQRKVPLSVHPRPRLAPRVYSQSS 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g0980 515 PRINTS P450 superfamily signature 305 322 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere03g0980 515 PRINTS P450 superfamily signature 358 369 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere03g0980 515 PRINTS P450 superfamily signature 439 448 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere03g0980 515 FunFam Cytochrome P-450 19 24 503 - -
Dere03g0980 515 SUPERFAMILY Cytochrome P450 36 505 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere03g0980 515 PANTHER CYTOCHROME P450 98A9 10 512 - -
Dere03g0980 515 PRINTS E-class P450 group I signature 398 422 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere03g0980 515 PRINTS E-class P450 group I signature 357 375 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere03g0980 515 PRINTS E-class P450 group I signature 294 311 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere03g0980 515 PRINTS E-class P450 group I signature 63 82 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere03g0980 515 PRINTS E-class P450 group I signature 87 108 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere03g0980 515 PRINTS E-class P450 group I signature 314 340 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere03g0980 515 PRINTS E-class P450 group I signature 179 197 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere03g0980 515 PRINTS E-class P450 group I signature 438 448 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere03g0980 515 PRINTS E-class P450 group I signature 448 471 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere03g0980 515 Gene3D Cytochrome P450 23 505 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere03g0980 515 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 441 450 IPR017972 GO:0005506|GO:0016705
Dere03g0980 515 Pfam Cytochrome P450 36 493 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere03g0980 Dere-ChrDere03 15044832 15047659 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere03g0980 14 515 Cytochrome P450 AT5G07990 64.047 0.0 685