Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g0978 ATGGCTTCCTCTGCGCCGTCTCCCTGGCTTCTCGGCTTGGCGACCCTGGTGTTAGCTAGCCTCCTTTATCGGCTTCTGAAGCTCTTCAAGCGACCTTCTCTTCCTTTGCCTCCGGGTCCCAGGCCATGGCCTATTGTCGGAAACTTGCCTCACCTGGGCCCTGTGCCGCACCACGCTCTCGCCGACTTGGCTCGCACCTACGGTCCTCTCATGCGCCTCCGCCTCGGCTTAGTCGACGTCTTGGTGGCCTCGTCGGCCTCCGTCGCCGAGCAGTTCTTGAAGGTCCACGACACCAACTTCCTGAGCCGCCCGCCCAACGCCGGAGCTAAGTACATCGCTTATAACTATCAAGACCTCGTCTTCGCTCCCTACGGCCCCCGCTGGCGCATGCTCCGGAAAATCAGCGCTGTTCATCTCTTCTCCGGCAAGGCCTTGGACGACTTTAGACACCTTCGTCAGGAAGAGGTAGCAAGATTGACACGTAATCTCGCAAGTGCTGGCTCACGCGCCGTAAACCTGGGGCAATTGTTGAACGTGTGTACCACCAACGCGCTAGGAAGGGTGATGATAGGGCGGCGCGTGTTCAACGACGGCGCTGACGGGTGCGACCCGAGGGCGGACGAGTTCAAGTCGATGGTGGTGGAGATTATGGTACTGGCCGGAGTGTTCAACATCGGAGACTTCATCCCGGCGCTGGAGTGGCTGGACCTCCAGGGAGTGCAGCGCAAGATGAAGGACGTACACAGGAGGTTCGATGCCTTCTTAACGAACATCATTGAGGAGCATAAGGTCTCCAAGAGCGAGCACCACAAGGACATGTTGAGTACATTGTTGTCGCTTAAGGAGGTTCAAGACGATGAAGGAACCAGGCTCACTGACGTCGAGATCAAAGCCCTGCTTCTGAACATGTTTTCGGCTGGGACTGACACGTCATCAAGCACAACAGAATGGGCCATAGCGGAATTGATCCGACACCCTAATATGCTGGCCCAAATCCAAGAAGAACTGGATTCCGTGGTGGGCCGAGACCGTCTTGTGAACGAGTTGGACTTACCCAATCTACCATACCTGCAAGCTTTTGTCAAGGAGACCTTCCGTCTGCACCCCTCGACCCCTCTCTCTCTTCCTCGAATCGCAGCAGAGAGCTGCGAGATCTTCGGCTACCACATCCCCAAGGGTGCGACTCTCCTGATGAATGTGTGGGCCATATCTCGTGACCCGAAAGAATGGTCTGACCCGTTAGTGTTCCGGCCCGAAAGGTTCCTCCCGGGCGGCGAGAAGGCAGGCGTCGATGTGAGAGGCAATGACTTCGAGGTGATTCCGTTCGGTGCTGGGCGTAGGATATGTGCAGGCATGAGCTTGGGCCTTCGCATGGTCCAGCTTCTCACTGCGACCTTGGCCCAAGCTTTTGATTGGGTCTTGGAAGATGAGCTTAACCCTGAAAAGCTTAACATGGAAGAGGCTTATGGTATCACCCTCCAACGAAAGGTCCCTCTCTCGGTGCACCCAAAGCCCCGCCTCGCGCCACGTGTCTACTCATCCTCCTCCTAA 1551 0.5674 MASSAPSPWLLGLATLVLASLLYRLLKLFKRPSLPLPPGPRPWPIVGNLPHLGPVPHHALADLARTYGPLMRLRLGLVDVLVASSASVAEQFLKVHDTNFLSRPPNAGAKYIAYNYQDLVFAPYGPRWRMLRKISAVHLFSGKALDDFRHLRQEEVARLTRNLASAGSRAVNLGQLLNVCTTNALGRVMIGRRVFNDGADGCDPRADEFKSMVVEIMVLAGVFNIGDFIPALEWLDLQGVQRKMKDVHRRFDAFLTNIIEEHKVSKSEHHKDMLSTLLSLKEVQDDEGTRLTDVEIKALLLNMFSAGTDTSSSTTEWAIAELIRHPNMLAQIQEELDSVVGRDRLVNELDLPNLPYLQAFVKETFRLHPSTPLSLPRIAAESCEIFGYHIPKGATLLMNVWAISRDPKEWSDPLVFRPERFLPGGEKAGVDVRGNDFEVIPFGAGRRICAGMSLGLRMVQLLTATLAQAFDWVLEDELNPEKLNMEEAYGITLQRKVPLSVHPKPRLAPRVYSSSS 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g0978 516 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 442 451 IPR017972 GO:0005506|GO:0016705
Dere03g0978 516 Gene3D Cytochrome P450 29 510 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere03g0978 516 PANTHER CYTOCHROME P450 98A9 11 513 - -
Dere03g0978 516 Pfam Cytochrome P450 37 493 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere03g0978 516 PRINTS P450 superfamily signature 359 370 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere03g0978 516 PRINTS P450 superfamily signature 440 449 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere03g0978 516 PRINTS P450 superfamily signature 306 323 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere03g0978 516 PRINTS P450 superfamily signature 449 460 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere03g0978 516 PRINTS E-class P450 group I signature 295 312 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere03g0978 516 PRINTS E-class P450 group I signature 180 198 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere03g0978 516 PRINTS E-class P450 group I signature 399 423 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere03g0978 516 PRINTS E-class P450 group I signature 439 449 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere03g0978 516 PRINTS E-class P450 group I signature 358 376 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere03g0978 516 PRINTS E-class P450 group I signature 88 109 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere03g0978 516 PRINTS E-class P450 group I signature 64 83 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere03g0978 516 PRINTS E-class P450 group I signature 315 341 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere03g0978 516 PRINTS E-class P450 group I signature 449 472 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere03g0978 516 SUPERFAMILY Cytochrome P450 37 506 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere03g0978 516 FunFam Red aleurone1 29 504 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere03g0978 Dere-ChrDere03 15012814 15016689 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere03g0978 15 516 Cytochrome P450 AT5G07990 67.976 0.0 729