Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g0954 ATGGCGCTGTTCAGAAGGTTCTTTTACCGGAAGCCGCCGGATCGGCTTCTGGAGATCTCCGAGAGAGTCTATGTTTTTGATTGTTGCTTCTCCACGGATATCTTGGAAGAAGATGAGTACAAAGTTTATATGGGGGGGATTGTAGCTCAGCTACAGGATCACTTTCCTGATGCTTCTTTCATGGTGTTTAACTTCAGAGAAGGGGAGAGGCGTAGTCAAATTTCAGACATATTGTCTCAATATGACATGACAGTTATGGAATACCCTCGTCAATATGAGGGTTGTCCACTTCTGGCTTTGGAAATGATTCATCACTTCCTTCGATCAAGTGAAAGCTGGTTGTCTTTGGAGGGGCAACAAAATGTTCTTTTGATGCATTGTGAAAGAGGAGGTTGGCCTGTTCTTGCATTTATGCTAGCAGGTCTTCTATTGTACCGGAAACAGTACAATGGGGAGCAGAAAACCCTTGAAATGGTCTATAAGCAAGCTCCTAGAGAACTTCTCCACCTTCTATCTCCTTTGAACCCACAGCCTTCTCAGTTGAGATATCTTCAGTACATTTCCAGGAGAAATCTGGGTTCTGAGTGGCCTCCATCAGACACACCCTTATATTTGGATTGTCTGATTCTTAGAGTTCTTCCATTATTTGATGGCGGAAAAGGTTGCAGGCCTGTTGTTCGTGTTTACGGTCAGGACCCTTCAAAACTTGTTAATAGAAGTTCTAAGCTTCTTTTTTCAACTTCAAAGAACCAAAAACATGTTCGCCTCTACCAACAGGCAGAGTGTATGCTGGTGAAAATTGATATCCATTGTCGTGTTCAAGGTGATGTGGTTCTTGAATGCATACATATGGATGAAGGCTTAGTTCGTGAGGAGATTGTGTTTAGAGTAATGTTTCACACAGCGTTTGTGCAGTCAAATATATTGTTGCTCAACCGTGATGAGGTTGATATTTTGTGGGATTCAAAGGATCAATTCCCCAAGGATTTTAAAGCAGAGGTGCTTTTTTTGGACGCTGATGCTGTTATACCTAATCTAACCACAGTCAGGGTGAGTGAAGATGCAAATGATACAGGCAGTGCTTCACCTGAGGAATTCTATGAGGTGGAAGAGATTTTCAGCAATGTAACTGATATGCAGGAAGGTAAGGTGGAGTATGATTCTCTTGTGGCTAATGACAGTGTAGTAGTTGATCAAAATAAAAAAGAAGTATGGAAAGAGGATTTGGATCCTCACACTTTTCAGGAATGTACAACAGACGATCGGATTCACAACCGGCACAAGCAGATAGATTCTGGCATTAATGCAGTGAAAGACATTGCAGTTGATGATGTTAAGTACAAGCTTGATGAGAGGGTGGATTCTGATCCTCATGCAGTGAAAGATATCGCTGTGGATGATGGAGAAATTAAGTCTACTTCTATGGTAGTCACTATGGATGTGATGAAAACTATGGAAATAAAGGATATCGATTCAGATGTGTATGGGCAATTGCCAGATATGGAAAACAAATATGATGAATTTGGCAATGCTGTTGAGAAGAAATTAGATTCCAAAGCAGGTCAGCAGAAGCCTGATATTTCCAGACAAAAATCTGATAAACTACCTGCTGCAAAAAAACAACTTTCATCAAACTCGAAGCCAGTGGGGGATACATTAGTAGCAAAGCAAAAAATTAAGCAGCAGGAATCACAAGGTGGTCAGGCAAAACAAGCAAAGCCAAATGCAGTGACTAGGTGGATTCCTACTAACAAAGGTTCTTATACAAATTCAATGCATATTTCATATCCACCATCAAGGTATAATAGTGCACCTGCCGCTCTTTCCAATTCAAAGGAGAAAATTATAGATGCCAAATTAAGGTCTGCCTCTGGAACACCTGTTTCTACTGACAAGACAAATGAACTGAAAAGTCAAAAGGTGGATGATTTAAAATCAGCAGACTCAATAGCAGAAGTGGAAGAAAACTGTGTACCATCTGTTGAAGAGACATTTCTTCAAACAGGAAGTCAGGCAACACAACTGAGCTCAGAGCAAGTGTTACAACCTCTGCCCCCACCACCTCCACCTCCACCTCCTCCTCCACCACCGCCTCCACCTCCATTTCATGCTAGAAACTCTTTGTCACATGTTTTTGAATCCTCAACACTGCAAGATTATGTAGCATCTCCTTCCCCTCCATCTTCTTCTTTGGGCAGAAAGGTATCTTCCCCACCACAATCACTGGCCGCTCTGCAGCCACCACCAATTCCTGCTAGTAGACAAAACCAAGGTATTGATTTACAGGTTGCAACTTCTTCGCTACCTCCTCCTCCACCCCCTCCACCCCCTCTGTTTACCAGTAGAGCAATTACATCAAAAGATTTTGGAGTGCCAAGTGTAGTTGCCCCTCCCCCTCCTCCTCCTCCACCGCCACCGCCACCGCCACCACCTCCACCTCCTCCGAGGTATGGAGTCTCCTCCTCTCCTCCTCCCATTACTTCCCTTCGGGTTCCACCTCCACCTCCACCTCCACCTCCACCACCCCCACCCCCACCACTCTCAAGGGGTTATTTGCCATCACCGTCAGCACCCCCACCTCCACCTCCACCTCCACCACCGCCACCACTTCTACCTTCTAGTAGAGCTTCATTGTCCCCGCCCTTGCCTCCTTTGAGTAGAGCTCCACCAACCCCACCTCCACCACCATCGTCCTCACCTTTGAGTAAGGCTCCACCTCCTCCACCCCCACCACCACCCCCTCCTCCACTGCCTTCAAGTGGAGCTCCACTGCCACCACCTCCACCTCCTTTTAGTAGAGCTCCACCACCACCACCTCCTCCTCCTTTTAGTAGAGCTCCACCACCTCCACCTCCTCCTCCCATGCATGGAGCCCCAACTTCACCTCCACCTCCGCCACCACCACCAAGAGGAGCACCGCCTCCACCACCACCTCCTCCATTACATGGAGCGCCTCCACCACCACCACCTCCTCCATCACATGGAGCACCTCCACCACCACCACCTCCTCGATTACATGGAGCGCCTCCACCACCACCACCTCCTGGTGGTCGAGGCCCACCTCCTCCCCCTCCACTTGGAGCGGGTGCTCCTAATGCTCCTGCTCCCCCTAGACCTCCAGGTGGTACACCTCCACCACCCCCACCCTTAGGCTCCAAAGGTTCAAACACTGATCCAAGAGGGAGAGGGCGTGGACTTTCACGTCCTACAGGGACTGTTGCAGCGGCACCCCGACGATCTTCCTTAAAGCCTCTACATTGGAGCAAGGTGACAAGGGCGATACAAGGAAGTTTATGGGAAGAATTACAGAGACACGGAGAACCTCAAATTGCACCAGAATTTGACTTTTCAGAGCTAGAGAGCCTCTTCTCTGCAAATGTTCCAAAGCCTGCTGGTTCAGGTGGTAAATCTGGAGATCGACGTAAATCTGCTGGGTCCAAACCTGACAAAGTCCACTTGATTGACTTGAGGAGGGCCAATAATACTGAAATTATGCTCACAAAGGTTAAGATGCCCCTTTCTGATATGATGGCTGCAGTACTAGCTATGGATGAGTCAGTATTAGATGTTGACCAGGTTGAAAATCTCATTAAATTTTGTCCAACCAAAGAGGAGATGGAACTTTTGAAGGGGTATGCTGGTGACAAAGAGAATTTGGGAAAATGCGAACAGTATTTTTTGGAGCTGATGAAAGTGCCGCGTGTGGAATCAAAATTAAGAGTATTTTCTTTCAAGATTCAGTTTGGTTCTCAGATTACCGAATTCAAGAAGAGTTTAAAAACTGTGAACTCTGCCTGTGAAGAGGTCCGAAGATCTGTCAAACTGAAGGAGATAATGAAGAAAATTCTTTTCTTGGGGAATACATTGAACCAAGGAACAGCAAGGGGATCGGCAGTTGGATTCAAGTTGGATAGTCTTTTAAAGCTCACTGACACTCGTGCTTCTAATAATAAGATGACACTCATGCATTATCTTTGCAAGGTCCTTGCTGAAAGGTCACCTGGGCTACTTGATTTTCACCTGGACCTTGTTAGCTTGGAAGCTGCTACTAAGATACAATTAAAGTCATTAGCAGAAGAGATGCAGGCAATCATCAAGGGATTAGAAAAGGTTAAGCAGGAGCTTGCTGCATCTGAAAATGATGGACCTGTATCTGAAGTTTTCCGTAAGACATTGAAAGAATTTGTTGCTGGGGCTGAGTCAGAGGTGGCATCTGTAACAAGTTTATATTCTGTGGTGGGTAGAAATGCAGATGCACTAGCGCTATATTTCGGTGAGGATCCAGCCCGTTGCCCATTTGAGCAAGTTACTGCAACTCTCCTAAATTTTATAAGGTTGTTTCGGAAAGCACATGAAGAAAATTGCAAACAAGCAGAGTTAGAGAAGAAGAAAGCTGAGAAAGAGGCCGAAATGGAGAAGGCCAAGGGCATTAACTTGACAAAGAAGAGTGCAAGATAG 4458 0.4585 MALFRRFFYRKPPDRLLEISERVYVFDCCFSTDILEEDEYKVYMGGIVAQLQDHFPDASFMVFNFREGERRSQISDILSQYDMTVMEYPRQYEGCPLLALEMIHHFLRSSESWLSLEGQQNVLLMHCERGGWPVLAFMLAGLLLYRKQYNGEQKTLEMVYKQAPRELLHLLSPLNPQPSQLRYLQYISRRNLGSEWPPSDTPLYLDCLILRVLPLFDGGKGCRPVVRVYGQDPSKLVNRSSKLLFSTSKNQKHVRLYQQAECMLVKIDIHCRVQGDVVLECIHMDEGLVREEIVFRVMFHTAFVQSNILLLNRDEVDILWDSKDQFPKDFKAEVLFLDADAVIPNLTTVRVSEDANDTGSASPEEFYEVEEIFSNVTDMQEGKVEYDSLVANDSVVVDQNKKEVWKEDLDPHTFQECTTDDRIHNRHKQIDSGINAVKDIAVDDVKYKLDERVDSDPHAVKDIAVDDGEIKSTSMVVTMDVMKTMEIKDIDSDVYGQLPDMENKYDEFGNAVEKKLDSKAGQQKPDISRQKSDKLPAAKKQLSSNSKPVGDTLVAKQKIKQQESQGGQAKQAKPNAVTRWIPTNKGSYTNSMHISYPPSRYNSAPAALSNSKEKIIDAKLRSASGTPVSTDKTNELKSQKVDDLKSADSIAEVEENCVPSVEETFLQTGSQATQLSSEQVLQPLPPPPPPPPPPPPPPPPPFHARNSLSHVFESSTLQDYVASPSPPSSSLGRKVSSPPQSLAALQPPPIPASRQNQGIDLQVATSSLPPPPPPPPPLFTSRAITSKDFGVPSVVAPPPPPPPPPPPPPPPPPPPRYGVSSSPPPITSLRVPPPPPPPPPPPPPPPLSRGYLPSPSAPPPPPPPPPPPPLLPSSRASLSPPLPPLSRAPPTPPPPPSSSPLSKAPPPPPPPPPPPPLPSSGAPLPPPPPPFSRAPPPPPPPPFSRAPPPPPPPPMHGAPTSPPPPPPPPRGAPPPPPPPPLHGAPPPPPPPPSHGAPPPPPPPRLHGAPPPPPPPGGRGPPPPPPLGAGAPNAPAPPRPPGGTPPPPPPLGSKGSNTDPRGRGRGLSRPTGTVAAAPRRSSLKPLHWSKVTRAIQGSLWEELQRHGEPQIAPEFDFSELESLFSANVPKPAGSGGKSGDRRKSAGSKPDKVHLIDLRRANNTEIMLTKVKMPLSDMMAAVLAMDESVLDVDQVENLIKFCPTKEEMELLKGYAGDKENLGKCEQYFLELMKVPRVESKLRVFSFKIQFGSQITEFKKSLKTVNSACEEVRRSVKLKEIMKKILFLGNTLNQGTARGSAVGFKLDSLLKLTDTRASNNKMTLMHYLCKVLAERSPGLLDFHLDLVSLEAATKIQLKSLAEEMQAIIKGLEKVKQELAASENDGPVSEVFRKTLKEFVAGAESEVASVTSLYSVVGRNADALALYFGEDPARCPFEQVTATLLNFIRLFRKAHEENCKQAELEKKKAEKEAEMEKAKGINLTKKSAR 1485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g0954 1485 FunFam Formin-like protein 1071 1459 - -
Dere03g0954 1485 Coils Coil 1448 1477 - -
Dere03g0954 1485 ProSiteProfiles Formin homology-2 (FH2) domain profile. 1072 1473 IPR015425 -
Dere03g0954 1485 SMART PTEN_C2_2 198 338 IPR014020 -
Dere03g0954 1485 Pfam C2 domain of PTEN tumour-suppressor protein 200 336 IPR014020 -
Dere03g0954 1485 Gene3D - 205 336 - -
Dere03g0954 1485 MobiDBLite consensus disorder prediction 537 584 - -
Dere03g0954 1485 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 201 336 IPR035892 -
Dere03g0954 1485 MobiDBLite consensus disorder prediction 1462 1485 - -
Dere03g0954 1485 PANTHER FORMIN-J 1 1482 - -
Dere03g0954 1485 MobiDBLite consensus disorder prediction 1462 1479 - -
Dere03g0954 1485 Gene3D Protein tyrosine phosphatase superfamily 14 204 IPR029021 -
Dere03g0954 1485 MobiDBLite consensus disorder prediction 516 584 - -
Dere03g0954 1485 Gene3D Formin, FH2 domain 1073 1459 IPR042201 -
Dere03g0954 1485 MobiDBLite consensus disorder prediction 708 741 - -
Dere03g0954 1485 SUPERFAMILY Formin homology 2 domain (FH2 domain) 1148 1475 - -
Dere03g0954 1485 MobiDBLite consensus disorder prediction 793 1053 - -
Dere03g0954 1485 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 13 188 IPR029021 -
Dere03g0954 1485 MobiDBLite consensus disorder prediction 750 764 - -
Dere03g0954 1485 MobiDBLite consensus disorder prediction 1125 1149 - -
Dere03g0954 1485 MobiDBLite consensus disorder prediction 681 704 - -
Dere03g0954 1485 MobiDBLite consensus disorder prediction 766 780 - -
Dere03g0954 1485 Pfam Formin Homology 2 Domain 1079 1447 IPR015425 -
Dere03g0954 1485 MobiDBLite consensus disorder prediction 661 1080 - -
Dere03g0954 1485 MobiDBLite consensus disorder prediction 516 536 - -
Dere03g0954 1485 MobiDBLite consensus disorder prediction 618 647 - -
Dere03g0954 1485 ProSiteProfiles C2 tensin-type domain profile. 200 339 IPR014020 -
Dere03g0954 1485 Coils Coil 1354 1381 - -
Dere03g0954 1485 SMART it6_source 626 1483 IPR015425 -
Dere03g0954 1485 MobiDBLite consensus disorder prediction 661 680 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere03g0954 Dere-ChrDere03 14575309 14585324 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere03g0954 1 611 FH2 protein (formin) Gene Family AT5G07740 66.234 0.0 825