Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g0952 ATGAGAGGAGGGTTTAAAGTGGTGGTGGTAAAGCCTCAATGTTTCCTTCTTCTTCTTCTTGTTCTTCTTTCCCTGTTCTTCCTCCTCTCTTCCCTTTCCAATGCTGCTTCAACTGCTAACTATTTCTCAGCTACTGTTAATTATCTAATCGATTGTGGCTCCTCCAACCAGACCATTCTTCAAGATGGCAGAACCTTCAAGTCTGATCGCGATTCTACTTCTCTTCTCTCCACGGAGGAGGACGTCCAAACTTCAGTTGACTCCATCAACCTTAATGCTTCCTCCTCTGTTCCTCCCACCTCACTTCCTTTATTCAAAAGTGCTAGAATTTTCACAGACAAATCCACCTACACTTTCTACATCTCCAAAATGGGTCGACTTTGGGTTCGTCTTTACTTCTTCCCTCTTCCACATCCTTCCTATAATCTCACCTCTGCGGTTTTCACTGTCCAAACTGATCGATTCGTCATCTTGCATAACTTCTCTGTCAAAGACAATACCTCATACGTGTTCAAAGAGTACCTCCTTAATGTCTCCGACTCTAGATTCTCCTTAAAATTCTTACCCAAGAAGAACTCTCTCGCTTTCATCAATGGTATTGAGGTTGTCTCTGCTCCTGACCCCCTTATCCCTGATACAGCAACTTCAGTTTCCCCACTTGGAGATTTCAAGGGGGTTTTTAACTATGCTCTTCAAGTATGTTACAGAGTTAACGTTGGAGGGCCAACCATAGCTCCAAACCAAGACACATTGTTAAGAACATGGGAGAATGATAGTTCCTATAATGTCTTCCTACGAGGGTCCCAGAATGTAGCTGTTTCAACAAAAATCATCAAATACCCACAAACAGGTGAGGTCACGCCACTGATTGCTCCTAGCACTATTTATTCCACAGCTATAGAAATGAAAGATCCTCAAGTAAACCAACCCAAATTCAACCTCACTTGGAGAATGGACGTGGAACAGGGTTACTCCTACTTGATAAGATTACACTTCTGCGACATTGTAAGCCAAAACCTCAACGAATTATACTTCAATGTGTACATAAACGAGATGATGGTTGTTCCATGTTTAGACCTTTCTTCTCAAACCCAAGCTCTATCCACTGCTTTCTACAAGGACTTTGTACTTAATGCTTCTACTATTACCAATGAGTCTATTTTGGTTCAAGTGGGTCCGGCGAATGACCATGGGACACCCAATGCGATTCTTAATGGACTCGAAGTGATGAAGATGAGCAATGGAGCTAATAGCTTAGATGGGCTTTTCTCTGTTGATGGGAAATACATGGGTCCAAGCTCAACCACCATGGCTCTGAAAGTTGCTGCTGCTGTAGGGTTAGGATTATCTCTGACAGCGATAATTCTCATTGCTGTGGTCTGTGTTCGATGGAGACAGAGGCCTAATGGGTGGGAAAAAAGAAAGAGCTTCTCATCATGGCTTCTTCCTATTCAATCCAACGGTCCTGGAAGCTTGTGTTCTGCTTCGAGCAAAAGTAGCTCTAGAAGGTCGAGCTTGTTCGGTTCTCGCAAAAGCAAAAATGGGTACTCTGGTTATTTAACAACAAGTGGCCTTGGTCGATTCTTCCCTTTCGATGAACTCCAACAAGCCACCAATAACTTCTATGAAAAAGCAGTGATTGGTGTCGGAGGCTTCGGAAACGTCTATCTTGGAACATTAGAAGATGGAACAAAGGTTGCTGTAAAACGAGGAAATCCAAGTTCAGAACAAGGCATAAACGAGTTCAGAACAGAGATAGAGATGCTCTCGAAACTCCGACATCGCCACTTAGTTTCCTTAATGGGTTTCTGTGACGAAAACTCAGAGATGATTCTTGTCTACGAATACATGGCTAACGGCCCTTTTCGTTCTCATCTCTACGGCTCAAACCTCCCTCCATTATCATGGAAACAGAGGCTTGAAATCTGTATAGGCTCTGCTCGTGGGCTTCACTATCTTCACACTGGTGCTGCACACAGCATCATTCACCGAGATGTGAAAACCACAAACATTCTCTTGGATGACAACTTCGTAGCTAAAGTTGCAGACTTCGGATTGTCCAAAGCGAACCCAGAGAAAACCCACGTGAGTACAGCAGTGAAGGGCAGTTTCGGATACCTCGATCCTGAATACTTCAGAAGCCAACAATTGACTGAGAAATCTGATGTTTATTCTTTTGGGGTTGTTCTCATGGAAGCACTGTGTGCGAGGCCTGTGATTGCCCCGACACGTCCGAGGGAACAGGTGAATTTAGCGGATTGGGCGTTGCAGCAACATAGGAAAGGGATGATTCATATGATCATCGATCCTCGTATTGCCGACACTATAACTACTGGGTCGTTGAACAAGTTTGTCGAAGCTGCTGAGAAGTGTCTGGAAGATCGTGGGGCGGATAGGCCTGCCATGGGAGATGTGTTGTGGAACTTGGAGTATGCTTTGCAGCTTCATGAGGCTGCTTCGAAGATCGAAGTTAATGAAGACAGAACAACGAATTCCATTGGGTTAGAACAGCCGAATAAGAAGGGCAAGAGTGGAGATCATTCTGGTACTCAGGCAAGCGAAGAGTCTGATGTGAACGATGTTGATTCTGCGTTGTTCTCACAGATCATTCACTTTGAAGGAAGATAA 2628 0.4414 MRGGFKVVVVKPQCFLLLLLVLLSLFFLLSSLSNAASTANYFSATVNYLIDCGSSNQTILQDGRTFKSDRDSTSLLSTEEDVQTSVDSINLNASSSVPPTSLPLFKSARIFTDKSTYTFYISKMGRLWVRLYFFPLPHPSYNLTSAVFTVQTDRFVILHNFSVKDNTSYVFKEYLLNVSDSRFSLKFLPKKNSLAFINGIEVVSAPDPLIPDTATSVSPLGDFKGVFNYALQVCYRVNVGGPTIAPNQDTLLRTWENDSSYNVFLRGSQNVAVSTKIIKYPQTGEVTPLIAPSTIYSTAIEMKDPQVNQPKFNLTWRMDVEQGYSYLIRLHFCDIVSQNLNELYFNVYINEMMVVPCLDLSSQTQALSTAFYKDFVLNASTITNESILVQVGPANDHGTPNAILNGLEVMKMSNGANSLDGLFSVDGKYMGPSSTTMALKVAAAVGLGLSLTAIILIAVVCVRWRQRPNGWEKRKSFSSWLLPIQSNGPGSLCSASSKSSSRRSSLFGSRKSKNGYSGYLTTSGLGRFFPFDELQQATNNFYEKAVIGVGGFGNVYLGTLEDGTKVAVKRGNPSSEQGINEFRTEIEMLSKLRHRHLVSLMGFCDENSEMILVYEYMANGPFRSHLYGSNLPPLSWKQRLEICIGSARGLHYLHTGAAHSIIHRDVKTTNILLDDNFVAKVADFGLSKANPEKTHVSTAVKGSFGYLDPEYFRSQQLTEKSDVYSFGVVLMEALCARPVIAPTRPREQVNLADWALQQHRKGMIHMIIDPRIADTITTGSLNKFVEAAEKCLEDRGADRPAMGDVLWNLEYALQLHEAASKIEVNEDRTTNSIGLEQPNKKGKSGDHSGTQASEESDVNDVDSALFSQIIHFEGR 875
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g0952 875 ProSitePatterns Protein kinases ATP-binding region signature. 547 569 IPR017441 GO:0005524
Dere03g0952 875 FunFam Putative receptor-like protein kinase 47 206 - -
Dere03g0952 875 CDD STKc_IRAK 547 810 - -
Dere03g0952 875 SMART serkin_6 541 812 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere03g0952 875 Pfam Protein tyrosine and serine/threonine kinase 545 738 IPR001245 GO:0004672|GO:0006468
Dere03g0952 875 FunFam receptor-like protein kinase FERONIA 504 616 - -
Dere03g0952 875 Gene3D - 42 206 - -
Dere03g0952 875 Gene3D - 229 414 - -
Dere03g0952 875 FunFam Receptor-like protein kinase FERONIA 230 414 - -
Dere03g0952 875 FunFam Receptor-like protein kinase FERONIA 617 829 - -
Dere03g0952 875 SUPERFAMILY Protein kinase-like (PK-like) 526 807 IPR011009 -
Dere03g0952 875 PANTHER OS07G0166700 PROTEIN 527 816 IPR045272 GO:0004714|GO:0006468
Dere03g0952 875 ProSiteProfiles Protein kinase domain profile. 541 819 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere03g0952 875 Pfam Malectin-like domain 50 412 IPR024788 -
Dere03g0952 875 Gene3D Phosphorylase Kinase; domain 1 506 616 - -
Dere03g0952 875 PIRSF SRK 394 862 IPR024171 GO:0004674
Dere03g0952 875 PIRSF SRK 12 69 IPR024171 GO:0004674
Dere03g0952 875 Gene3D Transferase(Phosphotransferase) domain 1 617 834 - -
Dere03g0952 875 ProSitePatterns Serine/Threonine protein kinases active-site signature. 661 673 IPR008271 GO:0004672|GO:0006468
Dere03g0952 875 MobiDBLite consensus disorder prediction 827 860 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere03g0952 Dere-ChrDere03 14561087 14563714 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere03g0952 38 848 Receptor kinase-like Gene Family AT5G61350 61.361 0.0 1030
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Dere03g0952 Malectin_like 1.2e-37 CL0202