Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g0922 ATGTTACTGCCTCCATTGTGCGCTTGTCCCTTTCTAGTTCCTCACTTTAACAAGGTGGTGGTGGTGATTCAGAGGAAGAGGATGAAGAAGGTTAGCAGAGTTGGCAGCACAGTGGTTCGAAATATTCGATACAGGGAATGTCAGAAGAATCATGCAGCTTCCATTGGAGGGTATGCTGTGGATGGTTGCAGAGAGTTCATGGCTAGCTCAAGGGAGGGGACAAGTGGAGCTCTTACGTGTGCTGCTTGTGGCTGTCACAGGAATTTCCACAGAAGAGAAGAGCAAACTGAGGTCGTCTGTGAGTACTCTCCTCCTGCTGCCTAA 324 0.4907 MLLPPLCACPFLVPHFNKVVVVIQRKRMKKVSRVGSTVVRNIRYRECQKNHAASIGGYAVDGCREFMASSREGTSGALTCAACGCHRNFHRREEQTEVVCEYSPPAA 107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g0922 107 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 44 93 IPR006456 -
Dere03g0922 107 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 33 95 - -
Dere03g0922 107 Pfam ZF-HD protein dimerisation region 42 94 IPR006456 -
Dere03g0922 107 NCBIfam ZF-HD homeobox protein Cys/His-rich dimerization domain 43 93 IPR006456 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere03g0922 Dere-ChrDere03 14171533 14173385 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere03g0922 20 107 Zinc finger-homeobox gene family AT1G18835 68.182 2.16e-35 114
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Dere03g0922 ZF-HD_dimer 1e-30 No_clan