Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g0921 ATGGTGAGACCACCCTGCTGTGACAAAATTGGGGTCAAGAAAGGCCCTTGGACTCCCGAAGAAGACATCGTCTTGGTCTCTTACATACAAGACCACGGTCCTGGCAATTGGCGATCTGTTCCCACCAATACTGGTCTCATGAGATGCAGCAAAAGCTGCCGACTTCGATGGACCAACTATCTTCGCCCAGGAATCAAACGAGGCAACTTCACCGACCATGAGGAGAAGATGATTATCCACCTCCAAGCTCTTCTGGGCAATAGGTGGGCGGCCATAGCTTCGTATCTTCCCCAGAGGACAGACAATGACATAAAGAATTTCTGGAATACCCATTTGAAGAAGAAGCTGAAGAAGAACGAAACAGGGATAGAGGGTAACAGTAACAATGATCAGCAAGAAGGTGGATATAACTCATCATCATCCTCGCAACCAAACAAGGGTCAGTGGGAGAGAAGGCTTCAAACAGATATCCACATGGCCAAACAAGCCCTCTGTGAGGCTCTCTCTCTGGACAAGCCCAGTAGTACTCATCCTCCAAACCCAGTCGCTCATACTAATTTCACTATCTCTGAGTCTGACACGAAGCCCTCCATTTCCTGTAACCCCATGACCACGAAATTACCCAATCAGACATCACCATCGTACGCATCGAGTGCCGATAATATAGCCCGATTGCTCCAGAACTGGATGAAGAAGACTCCGAACTCCGTGTCTGGTTCGACCTCCAGTGAAGGAGCACAGAGTGGGAGTGGGACTACTGCACTAGATCATGGCCTCGACCTCGACTACAGCTCTCTCCTCAGCTTCAATAACTCCTCCTCCAATCATAATAATAACAGTAATAATAACTCTGATGTGTCTACAGAGAGTAATAGCCTATTTCAAGAAGAAAGCAAGCCCAATTTGGACTCGCACGTGCCTTTCACGCTTCTGGAGAATTGGCTTTTTGATGATGCTGCAGCTTCTCAAGGCCACGAAGATCTACTGAACATGTCACTCCAGGAAACTACAGCAGGTCTATTTTAG 1026 0.4766 MVRPPCCDKIGVKKGPWTPEEDIVLVSYIQDHGPGNWRSVPTNTGLMRCSKSCRLRWTNYLRPGIKRGNFTDHEEKMIIHLQALLGNRWAAIASYLPQRTDNDIKNFWNTHLKKKLKKNETGIEGNSNNDQQEGGYNSSSSSQPNKGQWERRLQTDIHMAKQALCEALSLDKPSSTHPPNPVAHTNFTISESDTKPSISCNPMTTKLPNQTSPSYASSADNIARLLQNWMKKTPNSVSGSTSSEGAQSGSGTTALDHGLDLDYSSLLSFNNSSSNHNNNSNNNSDVSTESNSLFQEESKPNLDSHVPFTLLENWLFDDAAASQGHEDLLNMSLQETTAGLF 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g0921 341 CDD SANT 69 112 IPR001005 -
Dere03g0921 341 Gene3D - 68 139 - -
Dere03g0921 341 MobiDBLite consensus disorder prediction 173 216 - -
Dere03g0921 341 MobiDBLite consensus disorder prediction 170 216 - -
Dere03g0921 341 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Dere03g0921 341 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Dere03g0921 341 CDD SANT 16 61 IPR001005 -
Dere03g0921 341 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Dere03g0921 341 MobiDBLite consensus disorder prediction 122 149 - -
Dere03g0921 341 MobiDBLite consensus disorder prediction 119 149 - -
Dere03g0921 341 MobiDBLite consensus disorder prediction 233 254 - -
Dere03g0921 341 FunFam Transcription factor MYB30 68 126 - -
Dere03g0921 341 MobiDBLite consensus disorder prediction 272 300 - -
Dere03g0921 341 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 283 - -
Dere03g0921 341 MobiDBLite consensus disorder prediction 233 255 - -
Dere03g0921 341 FunFam MYB-related transcription factor 13 66 - -
Dere03g0921 341 Gene3D - 13 66 - -
Dere03g0921 341 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Dere03g0921 341 SMART sant 66 114 IPR001005 -
Dere03g0921 341 SMART sant 13 63 IPR001005 -
Dere03g0921 341 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 65 IPR017930 -
Dere03g0921 341 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 66 116 IPR017930 -
Dere03g0921 341 MobiDBLite consensus disorder prediction 272 299 - -
Dere03g0921 341 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere03g0921 Dere-ChrDere03 14131476 14132823 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere03g0921 1 333 MYB Transcription Factor Family AT5G62470 54.645 4.20e-114 333
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Dere03g0921 Myb_DNA-binding 3.4e-13 CL0123