Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g0907 ATGATGAGCGTTGAGTGGGAGGAGACGACGACGTGTCCAGGCGTTTTGGTAAGGGATAAGTGGGCGCCAGAGTACGAAGGCGAGGTTGAAAAAGAGGAGAGACAAACGCATCACGTGGGGAACTCATTGGTGGTGCTTCGCCGCACCAAAAAGGCATGGGCTCGCCACGCGCCTTCTTGTGACAGGTCCTCTCCCGCCACACTCTCTGTCTCACGCCGCCTCCTTCGTCTATACATTCACAGAATCCCTCTTTCTCATCCTCTTTCATCCTTCTCTCTCTCTTACCCTAATATCCTGCCAAGTACAAACTGTTCTATCCTTGCCTTTTACCTTCCCAGTGGTGAATCAGAGGGGGAAAGGGGAGGGGCATGGAAACGGAGGCAGATGGAGTGCTCTGCCTCGGGAGTCATCTCAACAACTTGAAGAATTCTGCGAAGGAATCGCAGGTTTGTTACTTCTTTTATGGGATCAGAGGCTCCGGCTCTGATGGCTGACGAAGTCAATATGTTAGAAGGAACATCAAAAACCAGATCTCGTCCTAGTAAAAAGAACCAAGGGAAAGTGCCCAAAAGAATTCACAAGGCTGAAAGGGAGAAAATGAAGCGTGAGCATTTGAACGATCTCTTTCTTGATCTTGCCAAAGCTCTTGAACTGAGTCAGCAAAACAATGGAAAGGCGTCCATATTGTGTGAAGCCACTAGGCTGCTAAGGGACCTGCTTGGTCAAATTGACTCGCTTAAGAAGGAGAATGTGTCTCTGCTGTCTGAATCGCATTATGTGACCATGGAGAAAAATGAGCTGAAGGAGGAAAATTCTGCTCTAGAGACTCAAATTAAGAAAATACAAGGCGAGATAGAAGCAAGAGTTGCACAATCTAAACCTGACTTAAATGTACGTCCTCCTTTGGAACTTGAGCCGCCAGAGCAAACAACAATATTTTCCCGAGAATTGCCTTCTGTTGATCCTACATTGCAGCAAGGACCTGCAGTCTTAGTTGTCCCCTTTCGTCCTCACCTTCAAGCTCCTTTTTCTGCTGCCAACGTCACCGAGCTCACCTCAAAACCTACCTCCGTTGTCAGTAAACCACATGCCAGGTATCCCACCCCTGCAGATTCGTGGCCATCGCAGCTGCTTGGAGAGCAACCAACTTCAAGTTAA 1158 0.4827 MMSVEWEETTTCPGVLVRDKWAPEYEGEVEKEERQTHHVGNSLVVLRRTKKAWARHAPSCDRSSPATLSVSRRLLRLYIHRIPLSHPLSSFSLSYPNILPSTNCSILAFYLPSGESEGERGGAWKRRQMECSASGVISTTXRILRRNRRFVTSFMGSEAPALMADEVNMLEGTSKTRSRPSKKNQGKVPKRIHKAEREKMKREHLNDLFLDLAKALELSQQNNGKASILCEATRLLRDLLGQIDSLKKENVSLLSESHYVTMEKNELKEENSALETQIKKIQGEIEARVAQSKPDLNVRPPLELEPPEQTTIFSRELPSVDPTLQQGPAVLVVPFRPHLQAPFSAANVTELTSKPTSVVSKPHARYPTPADSWPSQLLGEQPTSS 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g0907 385 Coils Coil 264 284 - -
Dere03g0907 385 MobiDBLite consensus disorder prediction 356 385 - -
Dere03g0907 385 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 189 239 IPR011598 GO:0046983
Dere03g0907 385 CDD bHLH_AtILR3_like 194 268 - -
Dere03g0907 385 PANTHER TRANSCRIPTION FACTOR BHLH47 155 384 - -
Dere03g0907 385 Coils Coil 236 256 - -
Dere03g0907 385 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 188 254 IPR036638 GO:0046983
Dere03g0907 385 Gene3D - 181 256 IPR036638 GO:0046983
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere03g0907 155 380 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G47640 51.822 3.00e-64 203
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere03g0907 03 13911131 13913740 Dere03g0907 03 13911131 13913740 ECH