Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g0898 ATGCAGGAGAACCAGATCATTACCAGTAAATCTGGAAATTCTCACAGAGGCTGTGTCAGTTTTTATGATGTGTTTTTAAGAGGCCATCTTCCTCTTATGGGAAATTGCTTTCGACCTCGTTCCAAGGTTGATAATACTCTCTCCTCTCGGCCTACTTCTGATTCTTCAAAAGTTCCTTGTAGAAGCACCCATTCCTATGCTAATTCAGGATCAGTGCACGTATACAGTGAAAAAGCTAAACCTGAGACTCTCCCCAGTCCGAGATCTGAAGGTGACATACTTTCCTCCCCACATTTGAAAGCCTTCACATTCAATGAGCTTAAGAATGTTACTAGAAACTTCTGTCCTGACAATCTACTGGGACAAGGGGGATTTGGCGATGTCTACAAGGGGTGGATTGATGAAAAATCCCTAAAAGCCGCAATGCCTGGATCTGGAATGGTTGTAGCAGTAAAGAAGCTAAAGTCTGAAGGATATCAAGGGCATAAGGAGTGGCTGTCAGAACTCATTTATCTTGGTCAACTTCATCATCCAAATCTTGTCAAACTTATTGGATTCTGCCTGGATGGGGATAGCCGGCTTCTGTTATACGAGTACATGCCAAAAGGCAGCTTGGAGAATCATCTATTTCACAAGGGCGCACGACCACTTTCTTGGGCAACAAGGATCAAAATTGCTATTGGCGCTGCTCGAGGTCTTACCTTCCTACATGACTCTAAGCAACAAGTCATCTACCGTGATTTCAAGGCTTCTAATATTTTATTAGATTCGGAATTTAATGCAAAACTCTCAGACTTTGGTTTTGCCAAAGCAGGGCCCACTGGCGATCATACTCATGTTTCCACTCAAGTCCTTGGTACTCATGGCTATGCTGCTCCTGAATATATTCTTACAGGTTGGCTAACTGCAAGGTGTGATGTCTATAGCTTTGGTGTTGTGCTATTGGAACTACTATCAGGACGCCGTGCCATTGATAAAACAAAATCTGGGGTTGAACAGAATCTGGTAGATTGGGCAAGACCTTATTTGGGTGATAGGAGGAAGCTATTCCGGATTATGGACACCAAATTAGAAGGTCAGTACCCCCAAAGGGCAGCTTATACAGCTGCAATCCTTGCACTACAGTGTATTAGTGAGGCCAAAATTAGACCCCAGATGTCTGAAGTTTTGGCAACTTTAGAACAGCTTTCACTTACTAAAACTTCAGCCAGTCCATCCAGATCCATAGCAGAGAGGAACTCCATCTCAGGCCCCACGGTAGAACAGAGTCATACAGAAACATCGTCCTTAAGACATAATAATCATTCAACGGAGAGGTTTGCCTCCAGTCTCATAAGTGAGAGCACGATGAGATCCCCACTGGCATCGCCTGTTAGATCTCCTAAGGGACAATGTAACAAGTACGGATGTTCTCTTCCAGTGGATACCACAACGTAG 1437 0.4391 MQENQIITSKSGNSHRGCVSFYDVFLRGHLPLMGNCFRPRSKVDNTLSSRPTSDSSKVPCRSTHSYANSGSVHVYSEKAKPETLPSPRSEGDILSSPHLKAFTFNELKNVTRNFCPDNLLGQGGFGDVYKGWIDEKSLKAAMPGSGMVVAVKKLKSEGYQGHKEWLSELIYLGQLHHPNLVKLIGFCLDGDSRLLLYEYMPKGSLENHLFHKGARPLSWATRIKIAIGAARGLTFLHDSKQQVIYRDFKASNILLDSEFNAKLSDFGFAKAGPTGDHTHVSTQVLGTHGYAAPEYILTGWLTARCDVYSFGVVLLELLSGRRAIDKTKSGVEQNLVDWARPYLGDRRKLFRIMDTKLEGQYPQRAAYTAAILALQCISEAKIRPQMSEVLATLEQLSLTKTSASPSRSIAERNSISGPTVEQSHTETSSLRHNNHSTERFASSLISESTMRSPLASPVRSPKGQCNKYGCSLPVDTTT 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g0898 478 ProSitePatterns Serine/Threonine protein kinases active-site signature. 243 255 IPR008271 GO:0004672|GO:0006468
Dere03g0898 478 SUPERFAMILY Protein kinase-like (PK-like) 92 394 IPR011009 -
Dere03g0898 478 Gene3D Phosphorylase Kinase; domain 1 86 199 - -
Dere03g0898 478 MobiDBLite consensus disorder prediction 41 72 - -
Dere03g0898 478 MobiDBLite consensus disorder prediction 402 436 - -
Dere03g0898 478 ProSiteProfiles Protein kinase domain profile. 114 398 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere03g0898 478 CDD STKc_IRAK 120 396 - -
Dere03g0898 478 FunFam Serine/threonine-protein kinase BIK1 82 199 - -
Dere03g0898 478 FunFam Serine/threonine-protein kinase PBS1 200 412 - -
Dere03g0898 478 PANTHER OS01G0588500 PROTEIN-RELATED 69 397 - -
Dere03g0898 478 ProSitePatterns Protein kinases ATP-binding region signature. 120 153 IPR017441 GO:0005524
Dere03g0898 478 Gene3D Transferase(Phosphotransferase) domain 1 200 415 - -
Dere03g0898 478 MobiDBLite consensus disorder prediction 41 91 - -
Dere03g0898 478 Pfam Protein tyrosine and serine/threonine kinase 118 333 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere03g0898 Dere-ChrDere03 13786751 13789645 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere03g0898 54 456 Glycoside Hydrolase AT3G07070 43.990 5.00e-108 325
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Dere03g0898 PK_Tyr_Ser-Thr 1.7e-42 CL0016