Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g0895 ATGGCGGATTCGCCTAATGGCTCTGCGAGTTTCTGGACTCAGGCTAACGCTCTGCTTCGGAAGAATTTAACATTCCAGAAACGAAATGTGAAGACAAATATCCGGCTCATTTTATACCCAATTATCCTTTGTTTGCTGCTTGTTCTCATCCAAAAGCTAGTTGATAATGAATTGGATAAGGCTAAAAATAAGTGTGGCTGCACTTGTACTAAGTCAGACAGCAATCAGTGTCAGGAGCAAGTCTGTGGGGTTGAGTACTCAGATTTGGATCAAGTTGGAACTTGTGCAATTCCTAATCCTCCAGAATGGCCTCCATTGTTACAACTGCCTGCTCCCCAATATCGCGCCATACAAACTGATATTCTTCCATTTTCAGATTTGCCAAATGATTCCTGCAGGAGGACTGGGTCATGCCCTGTAACTTTTCTCTTCACTGGCAATAATCAGTCCTTTGGAGAAATTTTGTCTGGAAACATGCTCAAAAGTAACTTCAGTGTAAATGATACTGACGTCGTAGGTAGTTTGGCAAGAAATGTCATGGGTTCAGAATCAATGCCGCAATACACCAATTTTCTTGAACCTGCTTTCTTTTCGGGTCTTCCCATTTATTATGTGCAAACTCAGTGCACACAGAACTCTACATTTGCTATTCCAATCCCGATATCAACCATTAATATACAGCAAGAGTTTAGATGTGCTCAAGGTTTACATTTATGGCGTAATAATTCTTCTGAGGTGAATGATGAGCTATATAAAGGTTATCATAAAGGGAACACTGAGAGAAAGATCAATGAGATAGTTGCAGCCTATGATTTTCTAAATTCCAATGGGAATAGATTTAATGTCAACATATGGTACAACTCAACCTACAAGAACAACACTGGCTTTCAGTCTATTGCATTGGCACGAATTCCCCGTTCAGTAAATCTGGTATCAAATGCCTACCTTCAGTTTCTGCGCCCAGGTATTGAGTTGTTATTTGAGTTTGTAAAGGAAATGCCAAAACCGGAGACCCCAACAAGGTTAGATGTGGCTTCTCTTCTAGGCGCTCTCTTCTTTACATGGGTCCTCCTGCAACTTTTCCCTGTTGCTTTGACATCACTGGTATATGAGAAGCAACAGAAACTAAGAATAATGATGAAAATGCATGGTCTTGGTGATGGGCCGTATTGGCTGATATCCTATGGTTATTTTCTTTCCATATCAGTGATCTACATGCTATTTTTTGTGATATTTGGCTCAGTCATAGGGTTAAAATTCTTTACAATGAATGACTACAGCATCCAATTTGTGTTTTATTTCATCTATATAAACTTGCAAATTTCGCTGGCATTTCTTATGGCTGCCATGTTTTCAAATGTTAAGACAGCTACAGTAATTGCATATATTGGTGTCTTTGGAACTGGGCTTTTAGGTGGCTTTCTTTTCCAATTTTTTGTTCAAGATACATCATTTCCAAGAGGGTGGATAATTGTTTTTGAGTTGTATCCTGGGTTTGCTTTATATCGCGGACTATATGAGTTTGCACAATATTCCTTCACTGGAGATGCTTTGGGAACTGATGGGATGCGGTGGGGAGACCTGAATGATAGCACAAATGGCATGAAAGAGATCTTGATCATCATGTTTATTGAGTGGTTTGTGGTGCTTTTTGTGGCTTATTATGTTGACCAAGTACTAGGAAGTGGCAAAAGTCCTCTTTTTTTCGTGAGAAGATTTCTGAAAAAGCCTAAGTCATCCTTCCGGAAGCCTAGTATTCAAAGGCAGGGATCTAAAGTTTTTGTTCAGATGGAGAAACTTGATGTCAGTCAAGAGAGGGAAAAGGTTGAGCAGCTGCTACTTGAACCAACTATTGATCATGCAATAGTATGTGACAACCTTAAAAAGGTGTATCAAGGGAGGGATGGAAACCCAGAGAAATTTGCTGTGAGAGGATTGTCTCTTGCTTTGCCTCAAGGAGAATGCTTTGGTATGCTTGGCCCCAATGGTGCTGGGAAGACCTCATTTATCAATATGATGATTGGTCTCACGAAGCCAACTTCTGGGACAGCATTTGTTCAAGGTCTGGACATAAGAACTCATATGGATGGAATATATACTAGCATGGGTGTATGTCCACAACACGACTTGCTGTGGGAAACTCTAACTGGAAGAGAGCACCTACTCTTCTATGGCAGACTTAAAAATCTTAAAGGCTCAGCCTTAGCACAAGCTGTGGAAGAATCTCTGAAAAGTGTAAACCTTTATCATGGAGGAGTTGCTGACAGACAAGCTGGAAAGTACAGTGGAGGAATGAAGAGAAGGCTTAGTGTTGCAATTTCCTTGATTGGAGATCCCAGAGTTGTTTATATGGATGAACCAAGTACTGGATTAGATCCTGCATCAAGGAACAACTTATGGAATGTTGTCAAACGTGCAAAGCAGAATCGTGCAATCATTCTCACCACACATTCTATGGAAGAGGCAGAGGCCTTATGTGATCGATTAGGAATATTTGTAGATGGAAGCTTGCAGTGCATAGGAAATCCAAAGGAGCTGAAAGCAAGATATGGTGGAAGTTATGTGTTCACGATGACAACACCTTTGGATCACGAGAATGAAGTGGAGAACTTGGTGCACAAGCTGTCCCCAAATGCTAACAAGACATACCATATCTCTGGTACCCAGAAATTTGAGCTGCCAAAAGAAGATGTTAGAATAGGGGATGTTTTCCGAGCTGTTGACACTGCAAAGAGAAACTTCACAGTTTTTGCATGGGGTTTAGCAGATACCACATTGGAAGATGTCTTCATTAAGGTTGCTCGTGGGGCTCAGGCATTCAACACCTTGTCATAA 2835 0.4085 MADSPNGSASFWTQANALLRKNLTFQKRNVKTNIRLILYPIILCLLLVLIQKLVDNELDKAKNKCGCTCTKSDSNQCQEQVCGVEYSDLDQVGTCAIPNPPEWPPLLQLPAPQYRAIQTDILPFSDLPNDSCRRTGSCPVTFLFTGNNQSFGEILSGNMLKSNFSVNDTDVVGSLARNVMGSESMPQYTNFLEPAFFSGLPIYYVQTQCTQNSTFAIPIPISTINIQQEFRCAQGLHLWRNNSSEVNDELYKGYHKGNTERKINEIVAAYDFLNSNGNRFNVNIWYNSTYKNNTGFQSIALARIPRSVNLVSNAYLQFLRPGIELLFEFVKEMPKPETPTRLDVASLLGALFFTWVLLQLFPVALTSLVYEKQQKLRIMMKMHGLGDGPYWLISYGYFLSISVIYMLFFVIFGSVIGLKFFTMNDYSIQFVFYFIYINLQISLAFLMAAMFSNVKTATVIAYIGVFGTGLLGGFLFQFFVQDTSFPRGWIIVFELYPGFALYRGLYEFAQYSFTGDALGTDGMRWGDLNDSTNGMKEILIIMFIEWFVVLFVAYYVDQVLGSGKSPLFFVRRFLKKPKSSFRKPSIQRQGSKVFVQMEKLDVSQEREKVEQLLLEPTIDHAIVCDNLKKVYQGRDGNPEKFAVRGLSLALPQGECFGMLGPNGAGKTSFINMMIGLTKPTSGTAFVQGLDIRTHMDGIYTSMGVCPQHDLLWETLTGREHLLFYGRLKNLKGSALAQAVEESLKSVNLYHGGVADRQAGKYSGGMKRRLSVAISLIGDPRVVYMDEPSTGLDPASRNNLWNVVKRAKQNRAIILTTHSMEEAEALCDRLGIFVDGSLQCIGNPKELKARYGGSYVFTMTTPLDHENEVENLVHKLSPNANKTYHISGTQKFELPKEDVRIGDVFRAVDTAKRNFTVFAWGLADTTLEDVFIKVARGAQAFNTLS 944
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g0895 944 ProSitePatterns ABC transporters family signature. 761 775 IPR017871 GO:0005524|GO:0016887
Dere03g0895 944 PANTHER ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA 589 938 IPR026082 GO:0016020|GO:0055085|GO:0140359
Dere03g0895 944 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 621 850 IPR027417 -
Dere03g0895 944 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 622 859 IPR003439 GO:0005524
Dere03g0895 944 Pfam ABC-2 family transporter protein 264 554 IPR013525 GO:0016020|GO:0140359
Dere03g0895 944 FunFam ABC transporter A family member 7 611 887 - -
Dere03g0895 944 Gene3D - 614 887 IPR027417 -
Dere03g0895 944 Pfam ABC transporter 644 788 IPR003439 GO:0005524
Dere03g0895 944 CDD ABC_subfamily_A 626 847 - -
Dere03g0895 944 SMART AAA_5 652 835 IPR003593 GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere03g0895 Dere-ChrDere03 13728526 13737602 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere03g0895 626 846 Calmodulin-binding Proteins AT2G36910 23.377 3.51e-12 68.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere03g0895 03 13728526 13737602 Dere03g0895 03 13728526 13737602 ECH