Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g0881 ATGGGTACTGTAGAATGGGTCGTCTTGGTGTTCTACACAGTAGTTTTCTGCCCCTCCTACCTTGCCCTCACTCAAGATGGTCTTACGTTGTTGGAAATCAAGAGCACATTGAATGATACTAAGAATCTTCTTAGCAACTGGAAAGATTCTGATGAATCTCACTGTACATGGACTGGTATCAGTTGTCATACCAGCGACCAACGGGTTCGCTCGATAAATCTACCTTACATGCAACTGGGAGGGATTATATCTCCTAGCATTGGGAAACTCAGTAGACTACAGAGACTGGCGCTTCATCAGAACAGCTTACATGGAATTATTCCTAATGAAATTACCAACTGTACTGAATTAAGAGCTCTGGATTTATCAAGCAACTCATTGAAGGGTGCTATACCTTCATCAATTGGCCGTCTCACGCATTTACAAGTTCTGAACTTGTCTACCAATTTTCTTTCTGGTGAAATCCCAGACAATGGAGTACTGAGCACTTTTGGAAACAACTCGTTTATTGGCAATTTAGATCTTTGTGGCCCGCAAGTTCAAAAGCTGTGTCGAAGCTCACTTGGTTTCCCTGTGGTATTACCACATGCTGAAAATGACGAAGCTGCAGGCAAATCTTCACATTACATGAAGGGGGTGGTAATTGGAGCTATGTCTGCAATGGGCCTTGCACTTGTTGTAATTCTTTCATTCCTCTGGATTTGTTCACTGTCAAGGAAGGAAAGAGCTGCAAGGAGATACACAGAAGTGAAGAAACAAGTCAATCCAGAAGCAGGTAAAAAACTTATTACCTTTCATGGTGACTTGCCATATCCATCCTCTGAGATCATAGAAAAGCTGGAGTCTCTTGATGAAGAGGATGTGGTAGGGTCTGGAGGTTTTGGTACTGTTTATCGAATGGTGATGAATGACTGTGGAACATTTGCCGTCAAGCGCGTTGATCGAAGTCGTGAAGGATCTGATCAGGCTTTTGAAAGGGAACTGGAGGTCTTGGGTAGCATCAAGCACATAAATTTAGTAAACCTGCGTGGTTACTGCAGGATCCCTTCTTCGAAGCTTCTCATCTATGATTATTTAGCTATGGGTAGCTTAGATGATCTATTACATGATAATACTGAACATACGTTATTGAATTGGGGTGCTCGCCTAAAAATAGCCCTTGGTTCTGCCCGGGGGTTGGCATACTTGCATCATGACTGCTGCCCAAAAGTTGTGCATCGAGACATAAAATCTAGCAACATCCTCCTTGACGAAAACTTGGAGCCCCGTGTCTCAGATTTTGGACTTGCGAAGCTTTTAGTTGATGAAGATGCTCATGTCACAACAGTGGTTGCTGGCACATTTGGCTATCTGGCACCAGAGTATCTACAAAGTGGGAGAGCCACAGAGAAATCGGATGTATATAGCTATGGAGTTCTATTGCTTGAACTCGTGACTGGAAAGAGACCTACGGATCCTTCTTTTGTAAAGAGAGGTTTTAATGTTGTTGGCTGGATGAACACATTACTGAGAGAGAACAGATTGGAGGATACAGTAGACAGAAGATGCACTGATGCAGATCCAGGAACAGTAGAAGTGATTCTTGAGCTAGCAGGAAAATGCACTGATGCAAACCCAGATGAGCGTCCATCGATGAACCAGGTGTTACAGTTGTTGGAACAGGAGGTTATGTCTCCTTGCCCAAGTGATTTTTATGAATCCCATTCTGAGCACTGTTAA 1719 0.4322 MGTVEWVVLVFYTVVFCPSYLALTQDGLTLLEIKSTLNDTKNLLSNWKDSDESHCTWTGISCHTSDQRVRSINLPYMQLGGIISPSIGKLSRLQRLALHQNSLHGIIPNEITNCTELRALDLSSNSLKGAIPSSIGRLTHLQVLNLSTNFLSGEIPDNGVLSTFGNNSFIGNLDLCGPQVQKLCRSSLGFPVVLPHAENDEAAGKSSHYMKGVVIGAMSAMGLALVVILSFLWICSLSRKERAARRYTEVKKQVNPEAGKKLITFHGDLPYPSSEIIEKLESLDEEDVVGSGGFGTVYRMVMNDCGTFAVKRVDRSREGSDQAFERELEVLGSIKHINLVNLRGYCRIPSSKLLIYDYLAMGSLDDLLHDNTEHTLLNWGARLKIALGSARGLAYLHHDCCPKVVHRDIKSSNILLDENLEPRVSDFGLAKLLVDEDAHVTTVVAGTFGYLAPEYLQSGRATEKSDVYSYGVLLLELVTGKRPTDPSFVKRGFNVVGWMNTLLRENRLEDTVDRRCTDADPGTVEVILELAGKCTDANPDERPSMNQVLQLLEQEVMSPCPSDFYESHSEHC 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g0881 572 ProSitePatterns Protein kinases ATP-binding region signature. 289 311 IPR017441 GO:0005524
Dere03g0881 572 SUPERFAMILY L domain-like 24 189 - -
Dere03g0881 572 Gene3D Transferase(Phosphotransferase) domain 1 359 561 - -
Dere03g0881 572 PRINTS Leucine-rich repeat signature 117 130 - -
Dere03g0881 572 PRINTS Leucine-rich repeat signature 138 151 - -
Dere03g0881 572 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 359 563 - -
Dere03g0881 572 Gene3D Ribonuclease Inhibitor 22 194 IPR032675 -
Dere03g0881 572 SMART serkin_6 283 557 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere03g0881 572 Pfam Protein kinase domain 285 550 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere03g0881 572 Pfam Leucine rich repeat 68 127 IPR001611 GO:0005515
Dere03g0881 572 Gene3D Phosphorylase Kinase; domain 1 244 358 - -
Dere03g0881 572 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 23 174 - -
Dere03g0881 572 Pfam Leucine rich repeat N-terminal domain 25 62 IPR013210 -
Dere03g0881 572 ProSiteProfiles Protein kinase domain profile. 283 557 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere03g0881 572 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 79 554 - -
Dere03g0881 572 SUPERFAMILY Protein kinase-like (PK-like) 268 553 IPR011009 -
Dere03g0881 572 ProSitePatterns Serine/Threonine protein kinases active-site signature. 404 416 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere03g0881 Dere-ChrDere03 13517142 13521792 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere03g0881 6 561 Receptor kinase-like Gene Family AT2G35620 46.034 0.0 535
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIIIa Dere03g0881 Pkinase 7.4e-50 CL0016