Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g0874 ATGGGCATGGATTACTATAACATACTGAAAGTGAATCGAAATGCGAGTGACGACGATTTGAAGAAGGCCTACAAGAGGCTAGCCATGATTTGGCACCCTGACAAGAACCCAGTTAACAAGAGGGAAGCTGAGGCCAAATTCAAGCAAATTTCCGAAGCTTACGACGTTTTAAGCGATCCCCAGAAGCGTCAGATCTATGATCTCTACGGCGAGGAGGCTCTCAAGTCTGGTCAGTTCCCGCCACCTCAGCAATCCTCCTCTTCTTCCATGTCCTCCCCGTCGTCTCGTGCTTACCAACATTTCCAAAACCAACAGCGCCAGCATTCGACGACGTCGTACCGGTTCAATCCCCGGGATGCCGACGACATATACGCCGAAATTTTTGGGTCGGAGAATGGTGGTGGTGGGAGGAATGGAGGACATAGGGATGGGTTTCTTAGGACGTCAAATGGTGCGTTTGGTGGAGCGGGAAGGAAGGCTGCGGCGGTGGAGACTGTTTTGCCGTGTAGCTTGGAAGAGCTCTACAAAGGTGTCAAGAAGAAGATGAAGATTTCAAGGAATGTCTTTGACGCTTATGGGAAGTTTCGGAATGTGGAGGAGATATTGACTATTGAGGTAAAACCTGGTTGGAAGAAAGGAACAAAGATTACTTTCCCCGAGAAGGGTAACCAGGAGCCTGGTGTCATTCCCGCAGATCTTGTCTTTGTGGTGGATGAGAAACCACACGCCGTGTATCGGAGGGATGGTAATGATCTGTTGATCAACCAGGAGATAACTCTTCTGGAGGCCCTTACAGGTAAAACCCTAGACCTCACTACCTTGGATGGAAGGAACCTCGTGATCCCACTGACTGATATTGTCAAACCTGGTGCTGAGGTTGTTGTCCCCAGTGAGGGAATGCCCATCTCGAAAGAGCCTGGGAAGAAGGGCAATTTGAGAGTTAAGTTTGAGGTTAAGTATCCTTCAAGGCTAACCCCAGAGCAGAAATCTGATCTGAGGAGAGTGTTGGGTGGGAATGGAGTCTCAAATGTTTGA 1035 0.4908 MGMDYYNILKVNRNASDDDLKKAYKRLAMIWHPDKNPVNKREAEAKFKQISEAYDVLSDPQKRQIYDLYGEEALKSGQFPPPQQSSSSSMSSPSSRAYQHFQNQQRQHSTTSYRFNPRDADDIYAEIFGSENGGGGRNGGHRDGFLRTSNGAFGGAGRKAAAVETVLPCSLEELYKGVKKKMKISRNVFDAYGKFRNVEEILTIEVKPGWKKGTKITFPEKGNQEPGVIPADLVFVVDEKPHAVYRRDGNDLLINQEITLLEALTGKTLDLTTLDGRNLVIPLTDIVKPGAEVVVPSEGMPISKEPGKKGNLRVKFEVKYPSRLTPEQKSDLRRVLGGNGVSNV 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g0874 344 Pfam DnaJ domain 4 67 IPR001623 -
Dere03g0874 344 CDD DnaJ 4 59 IPR001623 -
Dere03g0874 344 Gene3D - 242 322 - -
Dere03g0874 344 ProSitePatterns Nt-dnaJ domain signature. 47 66 IPR018253 -
Dere03g0874 344 SMART dnaj_3 3 62 IPR001623 -
Dere03g0874 344 Gene3D - 161 240 - -
Dere03g0874 344 SUPERFAMILY HSP40/DnaJ peptide-binding domain 165 242 IPR008971 GO:0006457|GO:0051082
Dere03g0874 344 PRINTS DnaJ domain signature 42 62 IPR001623 -
Dere03g0874 344 PRINTS DnaJ domain signature 6 24 IPR001623 -
Dere03g0874 344 PRINTS DnaJ domain signature 24 39 IPR001623 -
Dere03g0874 344 PRINTS DnaJ domain signature 62 81 IPR001623 -
Dere03g0874 344 SUPERFAMILY HSP40/DnaJ peptide-binding domain 245 330 IPR008971 GO:0006457|GO:0051082
Dere03g0874 344 Pfam DnaJ C terminal domain 163 321 IPR002939 -
Dere03g0874 344 FunFam DNAJ heat shock family protein 241 336 - -
Dere03g0874 344 ProSiteProfiles dnaJ domain profile. 4 70 IPR001623 -
Dere03g0874 344 Gene3D DnaJ domain 2 139 IPR036869 -
Dere03g0874 344 FunFam DnaJ subfamily B member 13 3 138 - -
Dere03g0874 344 FunFam Dnaj homolog subfamily b member 159 240 - -
Dere03g0874 344 SUPERFAMILY Chaperone J-domain 3 87 IPR036869 -
Dere03g0874 344 MobiDBLite consensus disorder prediction 78 116 - -
Dere03g0874 344 MobiDBLite consensus disorder prediction 74 116 - -
Dere03g0874 344 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 3 336 - -
Dere03g0874 344 CDD DnaJ_C 163 324 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere03g0874 Dere-ChrDere03 13456008 13459674 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere03g0874 5 74 C2H2 Transcription Factor Family AT1G74250 36.486 1.15e-09 57.8