Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g0869 ATGGAATGGCTAACCAATCGGTGGGTGGCTGCTGCTGCTAGCATATGGATACAGTGGAGCTGCGGTGCGTCCTACACCTTCAGCATCTACTCTCCGGTTCTCAAATCCACTCAGGCCTATGATCAATCCACGCTCGACACCGTTTCTGTGTTTAAAGATATTGGCGCCAACTTCGGCATCCTCTCCGGCTTACTCTACTCCGCCGTCACACCCTACGGTCCCTCCCGTGCTTCTGATTCGAAATCGAAATGGAGATTGCTGGGAGGTCCGTGGGTGGTTCATGCTGTCGGTGCGGTTCAGTGCTTCGCGGGTTTTATCTTCCTCTGGGCTGCGGTTGTTGGGTTGATCGGTCGGCCACCCATGGCGGTTATGTGCTTCTTCGCTTGGCTCGGTTCTAATGGCCAGACGTTCTTGAACACAACCAATGTGGTCACCGGCTTGCGCAATTTCCCGGAGTATAGTGGCACCATCGTGGGCATCATGAAGGGCTTTCTTGGACTTAGTGGAGCAATCCTGATCCAACTGTATCACACATTTTGTGATGGCGACCCAGCCACGTACCTCCTGATGCTTGCTTGCTTGCCTACATTCATCTGCCTATTGTTTATGTTTCTAGTGAGAATTTATGAAGTGCATGATGGTGATTACAAGAGGCACTTGAATGGTTTCTCTGTGGTCACTATGACTATTGTTGCTTATCTCATGTTCATTATAATTTTACAAAACATCCTCACTTTTCCATCTTGGGCACGTATTTTCACATTCGTAATCCTTATGTTTCTACTAGCATCACCTTTTGGAATTGCTACCAAAGCCCACTGGGAGGACTCCCGGCGATTTGTGCAAACCTGCTCATTTGAGAGCCCTCCTTTAACAAACAACCCTAAGTTAAATACATCCTCCAGTTCTTCTCCAGTAGGGGATCTTATGGAATATCAGCAGCTGCCTAGTGATGAGAGGCACTTACAGGCAACTTCAGATGACCTGTTAACTTATGAAGAAAAGAACCTCCTGCAAGCTATGTGCACGGTTGATTTTTGGCTGTTGTTTATAACAATGATATCTGGGTTGGGCTCAGGGCTGGCAACGATAAATAACATGAGCCAAATTGGGCAATCTCTTGGCTATAGTACTGTAGAGATCAATAATTTGGTGTCCTTATGGAGTATGTGGAACTTTCTTGGCCGTTTTGGAGGAGGCTATGTGTCGGACTACATCATGCACAGAAAAGGTTGGCCAAGGCCCTTGTTGATGGTCGTAACTCTGGGAGTTATGATTCTTGGCCATGTAGTCATAGCTTCTGGTTTCCCAGGAAATCTTTATTTGGGCCCTGTTCTGGTGGGCATTTCTTATGGTGCGAATTGGTCCTTGATGCCCACAATCACTTCTGAGATATTTGGTGTAAAGCATATGGGCACCATTTTCAATACCATCGCTGCTGCAAGTCCGCTTGGATCTTATATACTTTCTGTGAGGGTTGTTGGAAATATTTATGACAAGGAAGCCAATAAGGAAGATAATTCATGCTTGGGCACTCACTGTTTCATGTCATCTTTTCTGATCCTGGCAGGTGTGGCTTTTCTTGCATTTTTGGTTGGTCTGGCATTGTACTTCCGAACTAGAAGATTCTATGAGCAAATTGTGCTCAGAAGATTACGATATTCTTCAAAATGA 1674 0.46 MEWLTNRWVAAAASIWIQWSCGASYTFSIYSPVLKSTQAYDQSTLDTVSVFKDIGANFGILSGLLYSAVTPYGPSRASDSKSKWRLLGGPWVVHAVGAVQCFAGFIFLWAAVVGLIGRPPMAVMCFFAWLGSNGQTFLNTTNVVTGLRNFPEYSGTIVGIMKGFLGLSGAILIQLYHTFCDGDPATYLLMLACLPTFICLLFMFLVRIYEVHDGDYKRHLNGFSVVTMTIVAYLMFIIILQNILTFPSWARIFTFVILMFLLASPFGIATKAHWEDSRRFVQTCSFESPPLTNNPKLNTSSSSSPVGDLMEYQQLPSDERHLQATSDDLLTYEEKNLLQAMCTVDFWLLFITMISGLGSGLATINNMSQIGQSLGYSTVEINNLVSLWSMWNFLGRFGGGYVSDYIMHRKGWPRPLLMVVTLGVMILGHVVIASGFPGNLYLGPVLVGISYGANWSLMPTITSEIFGVKHMGTIFNTIAAASPLGSYILSVRVVGNIYDKEANKEDNSCLGTHCFMSSFLILAGVAFLAFLVGLALYFRTRRFYEQIVLRRLRYSSK 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g0869 557 Gene3D MFS general substrate transporter like domains 345 554 IPR036259 -
Dere03g0869 557 ProSiteProfiles Major facilitator superfamily (MFS) profile. 344 557 IPR020846 GO:0022857
Dere03g0869 557 Pfam Nodulin-like 90 268 IPR010658 -
Dere03g0869 557 Pfam Nodulin-like 7 68 IPR010658 -
Dere03g0869 557 CDD MFS_Mch1p_like 7 529 - -
Dere03g0869 557 Pfam Major Facilitator Superfamily 348 541 IPR011701 GO:0022857|GO:0055085
Dere03g0869 557 SUPERFAMILY MFS general substrate transporter 3 207 IPR036259 -
Dere03g0869 557 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 8 545 - -
Dere03g0869 557 SUPERFAMILY MFS general substrate transporter 227 542 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere03g0869 Dere-ChrDere03 13383071 13385453 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere03g0869 1 554 Nodulin-like Gene Family AT1G74780 57.762 0.0 624