Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g0865 ATGTCCCAAGGATCTCCTTCTCCCCCTCTGCCTTCTAGCGAACCGTCTAACCGATCCTCGCCTGAACCCAATTCCCAAAACCATATCTCCGATTCCCACAACGACGTCGTTCCCCCTTCTAGGGATGAAACTGCCGCCGCCGCAGCTGCAGCTCCCACCACTACGAGGAGCAACCGCCCACCTCGCGCGTGCACCATTCGCGCCGCTTCTCGTCTATATTCAACAGGACAGCCGGCGAACGGCCGGCGGCCCAAAGCTTCGAAGAAGGAGCAGCGGCTGCCAGAGGACTCGCCGGAGCAACAGCAGCAATGTAGCAAGATTGTGACACCGCTTGTGGAACCACCACCACCTTCGCAGTTGCCTCGTTGGAACCTGAGGTCCATGTGGGAGTTAGCTTCCATACTCAATTTCTTGCATGTGTTTAGGTCTCTTTTGAATATCTCAGTAGAATTCTCGGCGGAAGAGTTTGAGACAGCTCTCCTTACCCCCAACGACACATTGAGTGATATACATATGCCCTTGCTAAAGGCAATCCCTCCTGTTACACGAATGGCACTTACTCGTGATACTTGGATAACTGTATTATGCCGAAAATTGAGAGATTGGTGGCATTGGGTTGCAAATGGGGAACTTCCTATTGTTGCTTCACATGGGGTGGAAATTGAAGTATATAAATCACTTGATCCTGGGGTTCGTGTGGTCATCTTGAAGGCATTATGTGACATTCGTGTTGAGCAAGAAGACATACGAAGTTATATTGACAAGTCACTCAAACATGGTGTTCAACTTTCATCATTTCGTAAAGAGCGTATTGGGGGTGATTCACATGGAATATCTTATTGGTATGAAGATGACCCAATTATTGGTCATAGGTTGTATCGGGAAGTAAGGAAAACTGAAGTGATTCAAATAAAGAAAGGAAAACCAAAAGGTTCCCGGGTCAATTCTTGTACAACATACCAGTGGGAAGCAGTTGCTACTAATTTTGATGAATTTCAAGATGTCTCTGAAAAGCTTTTCTCAAGTAAGAACAGAATGGAAGCTTCACTTGGGAAAAAGCTGAAGATAGACATGCTTCCTGAGATTGAGAAAGTTCATAAGAGAAAAGAGAGGTTGCTGAAAAAGCAACACAGACAAGCTCTTCTTCTTGATAATTTCTTGGTTATTGATGGGATTGGTCCTGGGCGTTCACTTCGTGATAGGAAACCTGTTACCTACACGTTTGATGATTATGATCGGTCCATCAATGAGGCAATTAAGATAACTAAACAGAAACAACCATCCCCAGAGCCTATACCCAGGAGAGAAGTAGTAGGAAAACCTGAAGCTTTGACTAACGGCAAGTTGAGCGGTCCTTCACAGGTCATTCAATATCTGAATTTTGGTATGCCATCTCCAAAATCACCTGACTTTGATGATGCTGAGGAAGAGCATAAATCTGAACCATTGGATAGAAGTAATCGGCGAAGACAAAGGCCTAACCGGTATTCAGAGAAAGAGTTTGTTGAAGCAGCATCAGATGATGAGGCAGACTTTGACAGTGATGATGATATTGTTGGAGAAGCCGTATATGATGAAGAATATCTCAGGCAACGTAAGCAAAGAAAGAAGGTTTCTAGTAGCTCTGAAGGAGATGAAGAATATCAGTGGGATGAAGAAAATTTTGAAGAAGAAGAAGAAGAAGAAGATCAGGAAGATTCATTGAGTATCAGTGAGGACAGTGACAGGCCCCGTAAATACAAGCAATTGCCAGGCCGCACTAGGAGGGAAACTAAACTCAGGTCTGTGGGTGAGATTCAATCAGGTCTACGACGCAGTAAGAGGGCTACCAGAAACCGCATAAATTACCGACAATACGTGGTGTCAGAATCTGAAACAGAGTCTACAAAACCTGAGAGGTCTAATGCCACTGATGATCACTCAGATCCCAGTGAGAATGAGAACAGGGAATATATGATGGAAACTGAAGATTCAGATGGCAATGATGATGAAGAGCAGGAGGATGAACAGGACATAAATGTAGATAAGCCTATTGCTTATCCTGTGGAAGAGAAAGAAAAAAACCAGCCTCCTGAAAAATTGAATAGTCCCAGTGAGGAGGAAGTTGGGGGCATGACAAAAAGACGCTTCCTCGATTTGAATGAGCTTGCACCTAGCTCAGGTTTTGATGATGGTCCAAACATGATAATGAAAGACGAAGACAACAATGATTACTGA 2217 0.4443 MSQGSPSPPLPSSEPSNRSSPEPNSQNHISDSHNDVVPPSRDETAAAAAAAPTTTRSNRPPRACTIRAASRLYSTGQPANGRRPKASKKEQRLPEDSPEQQQQCSKIVTPLVEPPPPSQLPRWNLRSMWELASILNFLHVFRSLLNISVEFSAEEFETALLTPNDTLSDIHMPLLKAIPPVTRMALTRDTWITVLCRKLRDWWHWVANGELPIVASHGVEIEVYKSLDPGVRVVILKALCDIRVEQEDIRSYIDKSLKHGVQLSSFRKERIGGDSHGISYWYEDDPIIGHRLYREVRKTEVIQIKKGKPKGSRVNSCTTYQWEAVATNFDEFQDVSEKLFSSKNRMEASLGKKLKIDMLPEIEKVHKRKERLLKKQHRQALLLDNFLVIDGIGPGRSLRDRKPVTYTFDDYDRSINEAIKITKQKQPSPEPIPRREVVGKPEALTNGKLSGPSQVIQYLNFGMPSPKSPDFDDAEEEHKSEPLDRSNRRRQRPNRYSEKEFVEAASDDEADFDSDDDIVGEAVYDEEYLRQRKQRKKVSSSSEGDEEYQWDEENFEEEEEEEDQEDSLSISEDSDRPRKYKQLPGRTRRETKLRSVGEIQSGLRRSKRATRNRINYRQYVVSESETESTKPERSNATDDHSDPSENENREYMMETEDSDGNDDEEQEDEQDINVDKPIAYPVEEKEKNQPPEKLNSPSEEEVGGMTKRRFLDLNELAPSSGFDDGPNMIMKDEDNNDY 738
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g0865 738 MobiDBLite consensus disorder prediction 570 595 - -
Dere03g0865 738 MobiDBLite consensus disorder prediction 1 116 - -
Dere03g0865 738 Pfam DDT domain 133 178 IPR018501 -
Dere03g0865 738 MobiDBLite consensus disorder prediction 545 569 - -
Dere03g0865 738 MobiDBLite consensus disorder prediction 447 461 - -
Dere03g0865 738 MobiDBLite consensus disorder prediction 469 503 - -
Dere03g0865 738 PANTHER REMODELING AND SPACING FACTOR 1 43 733 IPR028938 GO:0006355|GO:0031213
Dere03g0865 738 MobiDBLite consensus disorder prediction 523 544 - -
Dere03g0865 738 MobiDBLite consensus disorder prediction 672 694 - -
Dere03g0865 738 MobiDBLite consensus disorder prediction 656 671 - -
Dere03g0865 738 MobiDBLite consensus disorder prediction 626 655 - -
Dere03g0865 738 MobiDBLite consensus disorder prediction 17 34 - -
Dere03g0865 738 MobiDBLite consensus disorder prediction 504 522 - -
Dere03g0865 738 MobiDBLite consensus disorder prediction 423 738 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere03g0865 Dere-ChrDere03 13295920 13305547 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR DDT Dere03g0865 DDT 9.3e-07 No_clan