Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g0852 ATGGAAGGCTTTTTTCCCGAGAAATTTCTGGGTGAGATTTTCTGGGATGAATCTCTTTCTCTGGAAAATCAGAGTGATTCTCTTCGATATACAGAGATACCCAGAACTGGGCCCGAGTTAGAAAGCTTGCGTGTCGGATCAAATTCCCAGAACTCCAAGGATGAAGGTGAACCTCCTCCTGCTGCTAATCAGGGCGATACTCTTCTATATGGTGACACAGCCAGAGTTGGATTTGGACCAGAAAGTTCTCGGATTGGGTCAGATTCAAATCAAATTGCTTTTGCACAACATGGAGGTGACCTACCTGGAATCGGATTTGGGCCAGCAAGTTCTTGTTTCTTCAACATGAAAGATCATGGTCGTGGAGCTTCTCAATCTCCTGCAAATCGAAGTGTTTTTGTTCAATACAGAGACCTACCCAGAATAGGATTTGGTCAAGGAAGATCAAATTCTATAAGTATGAGCAGAAGAATGATTGATTTCTTGAGAAAAAGTTGGCCCGTGGAAAGAAGCAACATAGCAGAGTACGAACGAGAACGAGGTTTCAGGCATATGATTAACGAGAGGATGAGGAGGCAGAGGCAGAGGCAGTGTGGCTTGGCTCTGCACTCTGTATTACCATTTGGGACCAAAAATGATATTAATTCGGTCATTCAAGTGGCAGCGAAGGAGATTCAAAGGCTTCAAGCTCACAGGGATGAATTGAAGAGTCAAAATTCTGAGCTTGAAGCAAATGATAAAGCTGTAGAAGGCAGCAAATTCGGATTCAGATTGGCTAATCCTACATCTGCAATCGATTCTATGCTTGAGGTGCTTCAATTCTTGAAGGGTATTGGAGTGAATACCAGAAGCATCACATCAAAATTCTCCTCGGGGGGGCTGTTTCCAATGTTAGAAATTGTACCCAAGATTGGAGATGCTGAGGTAGAAAGGGCAATTCAAGGAGCACTGAGTGAAATTGAATGGAAGCACCGTTGTCATGAGTGGGAAGTTTCCAAAAGGCAAAGAACAGGAAATGAGAAATGA 1026 0.4337 MEGFFPEKFLGEIFWDESLSLENQSDSLRYTEIPRTGPELESLRVGSNSQNSKDEGEPPPAANQGDTLLYGDTARVGFGPESSRIGSDSNQIAFAQHGGDLPGIGFGPASSCFFNMKDHGRGASQSPANRSVFVQYRDLPRIGFGQGRSNSISMSRRMIDFLRKSWPVERSNIAEYERERGFRHMINERMRRQRQRQCGLALHSVLPFGTKNDINSVIQVAAKEIQRLQAHRDELKSQNSELEANDKAVEGSKFGFRLANPTSAIDSMLEVLQFLKGIGVNTRSITSKFSSGGLFPMLEIVPKIGDAEVERAIQGALSEIEWKHRCHEWEVSKRQRTGNEK 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g0852 341 Coils Coil 218 248 - -
Dere03g0852 341 MobiDBLite consensus disorder prediction 42 57 - -
Dere03g0852 341 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 179 228 IPR011598 GO:0046983
Dere03g0852 341 MobiDBLite consensus disorder prediction 30 67 - -
Dere03g0852 341 PANTHER TRANSCRIPTION FACTOR BHLH041-RELATED-RELATED 1 319 IPR044658 -
Dere03g0852 341 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 176 243 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere03g0852 Dere-ChrDere03 13140298 13143327 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere03g0852 149 290 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G43650 42.177 4.78e-31 115