Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g0847 ATGGGAGCATGTCTCCCATTCTCTCCCCCATCTAATCCGACGACGATGGTTTCTCCGCCGCCGACTTACCGGCGTTTATTATATGATTGTTTTTGGTGCTCTGGAATTGGTGAAAGTATGATTGATTTCTCCGCCCAAAAGACGGAGGAAGAGCACAAGCTGTTCTTGGTCAGATTGCAGAAGGTAGGGAAAGGCGATTGGAGAGGGATCTCAAGGATCTATGTGAAAACAAGCACTCCAACACAGGTTGCGAGCCATGCTCAGAAGCACTTTCTTCGGAAAAGCAACCATAATCTTCAACGTCGTAGATCCAGCTTATTTGACATTACCACCGACACGGTCTCGGCAATTCCAATGGAAGAACAGGTCCAGCATCAAGATAATATGCCTCATTCACATTTTCTGCACCCTGCATCCTCTGAAACTAGTAACATCAATGGATTTTCAATGATGCCAATATATCCTATGCCTGTTGGTTCTGAAGTGATTTCATTCCCTGTCGGGAATACAGTGGAAAAGCTCACTCTAGGGCATGGAAATTCCGAACACAAGGGGCCAGCAAAGGTTGTCCGTCCAATTCCTGTTGTTCCAGATCCTAAAGCTTCTGTAGTGTCTAATATTGCCTTAAGTTCAGGCTCGTCTATAGATCTACCGACACTGTCTCTCGGGCTATCCCTGTCATCGGATCAGAGAATGGCATCATCAAGGCACTCAGGTTTACATGCTATGCCATGTTTCAACAATGGAGATAGCATCATAAGTGTTGCTTGA 771 0.4565 MGACLPFSPPSNPTTMVSPPPTYRRLLYDCFWCSGIGESMIDFSAQKTEEEHKLFLVRLQKVGKGDWRGISRIYVKTSTPTQVASHAQKHFLRKSNHNLQRRRSSLFDITTDTVSAIPMEEQVQHQDNMPHSHFLHPASSETSNINGFSMMPIYPMPVGSEVISFPVGNTVEKLTLGHGNSEHKGPAKVVRPIPVVPDPKASVVSNIALSSGSSIDLPTLSLGLSLSSDQRMASSRHSGLHAMPCFNNGDSIISVA 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g0847 256 FunFam transcription factor MYB1R1 46 96 - -
Dere03g0847 256 NCBIfam myb-like DNA-binding domain, SHAQKYF class 48 94 IPR006447 GO:0003677
Dere03g0847 256 Gene3D - 48 96 - -
Dere03g0847 256 PANTHER TRANSCRIPTION FACTOR KUA1 47 199 - -
Dere03g0847 256 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 48 95 IPR017930 -
Dere03g0847 256 CDD SANT 48 91 IPR001005 -
Dere03g0847 256 SUPERFAMILY Homeodomain-like 48 95 IPR009057 -
Dere03g0847 256 Pfam Myb-like DNA-binding domain 48 90 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere03g0847 Dere-ChrDere03 13073590 13075229 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere03g0847 03 13073590 13075229 Dere14g0519 14 5356217 5357889 CCT