Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g0838 ATGAGTATGGCCGGCGACGTTTTTAGGCTCGCTTTGCCCCAAGTTCTCGAGGAATCGCCTTCCGGTTCTGGGGAACTCCATGTTCTTGCCGTCGATGACAGTCATGTCGATCGTAAGGTCATCGAACGCTTGCTAAAAATTTCTTCTTGCAAAGTGACGGTTGTGGAGAGTGGAACCAGGGCTCTGCAGTATTTGGGATTGGATGGAGAGACGAACTCCATTGGGTTTAATAGTGCGAAGGTTAATCTGATCATGACGGATTATTCCATGCCGGGGATGACAGGATATGAACTTCTCAAGAAGATCAAGCAGGAGTCATCTATTTTTAGAGAGATTCCAGTGGTGATCATGTCCTCTGAGAACATTTTGACGCGAATTGATAGGTGTTTGGAGGAAGGAGCAGAGGAATTTCTATTGAAGCCAGTGAAGTTATCAGATGTGAAACGGTTGACAGATTTCATCATGAGAGGTGAAAGGAAGGAAAAAGAGAGAAGATCTCATAAAAGAAGGCGATCTGATGATCACAGTTCATCCCCTTCAGATCTGCCCTCAACGAAGTCTCGTTCATGTGATTCGTCATCAATTCGACTTTCATGTACGTCCCCATCTGCCTTGTCCTCAAAGAAATCAAGATTGCAAGCAGAGATTGAATAG 654 0.4495 MSMAGDVFRLALPQVLEESPSGSGELHVLAVDDSHVDRKVIERLLKISSCKVTVVESGTRALQYLGLDGETNSIGFNSAKVNLIMTDYSMPGMTGYELLKKIKQESSIFREIPVVIMSSENILTRIDRCLEEGAEEFLLKPVKLSDVKRLTDFIMRGERKEKERRSHKRRRSDDHSSSPSDLPSTKSRSCDSSSIRLSCTSPSALSSKKSRLQAEIE 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g0838 217 MobiDBLite consensus disorder prediction 158 177 - -
Dere03g0838 217 SUPERFAMILY CheY-like 25 170 IPR011006 -
Dere03g0838 217 Gene3D - 26 215 - -
Dere03g0838 217 CDD REC_typeA_ARR 28 150 - -
Dere03g0838 217 MobiDBLite consensus disorder prediction 178 210 - -
Dere03g0838 217 Pfam Response regulator receiver domain 28 148 IPR001789 GO:0000160
Dere03g0838 217 ProSiteProfiles Response regulatory domain profile. 27 155 IPR001789 GO:0000160
Dere03g0838 217 MobiDBLite consensus disorder prediction 158 217 - -
Dere03g0838 217 PANTHER TWO-COMPONENT RESPONSE REGULATOR 26 213 IPR045279 GO:0009736
Dere03g0838 217 SMART REC_2 26 151 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere03g0838 Dere-ChrDere03 12970286 12971917 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere03g0838 26 169 Response Regulator Gene Family AT3G48100 78.621 1.31e-76 227
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Dere03g0838 Response_reg 1.9e-21 CL0304